RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 GABRA5P31644 462 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 PDX1P52945 283 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 MFAP4P55083 255 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 TPD52P55327 224 aaPredicted RBP3.44□□□□□ -1.86
CCDC38-204ENST00000546816 GSCP56915 257 aaPredicted RBP3.44□□□□□ -1.86
CCDC38-204ENST00000546816 DCAF7P61962 342 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 CDK3Q00526 305 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 AIMP2Q13155 320 aaKnown RBP3.44□□□□□ -1.86
CCDC38-204ENST00000546816 NFATC2Q13469 925 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 SLC25A53Q5H9E4 307 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 SPDYCQ5MJ68 293 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 GPRIN3Q6ZVF9 776 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 HAUS6Q7Z4H7 955 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 ARHGAP24Q8N264 748 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 Q8N377 158 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 NIPA2Q8N8Q9 360 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 SLCO2A1Q92959 643 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 NEK1Q96PY6 1258 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 USP28Q96RU2 1077 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 LMF2Q9BU23 707 aaKnown RBP3.44□□□□□ -1.86
CCDC38-204ENST00000546816 FNDC11Q9BVV2 318 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 NUP85Q9BW27 656 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 WWTR1Q9GZV5 400 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 SPATC1LQ9H0A9 340 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 SHARPINQ9H0F6 387 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 EIF2B3Q9NR50 452 aaKnown RBP3.44□□□□□ -1.86
CCDC38-204ENST00000546816 WSB2Q9NYS7 404 aaPredicted RBP3.44□□□□□ -1.86
CCDC38-204ENST00000546816 B3GAT1Q9P2W7 334 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 GRID1Q9ULK0 1009 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 MOB4Q9Y3A3 225 aa3.44□□□□□ -1.86
CCDC38-204ENST00000546816 KLF2Q9Y5W3 355 aaPredicted RBP3.44□□□□□ -1.86
CCDC38-204ENST00000546816 A0A1W2PPR1 153 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 ANKRD61A6NGH8 418 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 C15orf61A6NNL5 157 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 MED24O75448 989 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 ZWINTO95229 277 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 KRTAP1-4P0C5Y4 121 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 MMP12P39900 470 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 SIRPAP78324 504 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 ELAVL2Q12926 359 aaKnown RBP3.43□□□□□ -1.86
CCDC38-204ENST00000546816 SQLEQ14534 574 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 NR1D2Q14995 579 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 E2F5Q15329 346 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 WLSQ5T9L3 541 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 C20orf194Q5TEA3 1177 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 SLC25A47Q6Q0C1 308 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 BTN2A1Q7KYR7 527 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 EID3Q8N140 333 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 LINC00612Q8N6U2 182 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 NPEPL1Q8NDH3 523 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 OR10G8Q8NGN5 311 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 ZNF519Q8TB69 540 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 ARHGAP45Q92619 1136 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 CCDC34Q96HJ3 373 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 GPATCH1Q9BRR8 931 aaKnown RBP3.43□□□□□ -1.86
CCDC38-204ENST00000546816 NUDT4Q9NZJ9 180 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 CACNG4Q9UBN1 327 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.43□□□□□ -1.86
CCDC38-204ENST00000546816 PPP1R3CQ9UQK1 317 aa3.43□□□□□ -1.86
CCDC38-204ENST00000546816 FEZF1A0PJY2 475 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 PTGES3LE9PB15 166 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 CAPN2P17655 700 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 PNLIPRP2P54317 469 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 PAX9P55771 341 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 MAZP56270 477 aaKnown RBP3.42□□□□□ -1.86
CCDC38-204ENST00000546816 HUNKP57058 714 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 COX10Q12887 443 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 RAPSNQ13702 412 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 RAB41Q5JT25 222 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 OR52N5Q8NH56 324 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 SMAP2Q8WU79 429 aaPredicted RBP3.42□□□□□ -1.86
CCDC38-204ENST00000546816 C10orf90Q96M02 699 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 DGCR6LQ9BY27 220 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 OR2B2Q9GZK3 357 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 SMARCAD1Q9H4L7 1026 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 P4HTMQ9NXG6 502 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 THEGQ9P2T0 379 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 DAPK2Q9UIK4 370 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 ZNF148Q9UQR1 794 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 PPP2R2CQ9Y2T4 447 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 PCDH11YQ9BZA8 1340 aa3.42□□□□□ -1.86
CCDC38-204ENST00000546816 IGHV3OR16-10A0A075B7F0 116 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 OR2A25A4D2G3 310 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 MPTX1A8MV57 137 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 EPB41L2O43491 1005 aaKnown RBP3.41□□□□□ -1.86
CCDC38-204ENST00000546816 MAGEC1O60732 1142 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 RBMS1P29558 406 aaKnown RBP3.41□□□□□ -1.86
CCDC38-204ENST00000546816 SLC15A1P46059 708 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 ARSEP51690 589 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 CALCOCO2Q13137 446 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 CCDC30Q5VVM6 783 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 TMCO3Q6UWJ1 677 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 TMPRSS11FQ6ZWK6 438 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 RTN4RL2Q86UN3 420 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 ADIPOR2Q86V24 386 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 CEP57Q86XR8 500 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 CFAP206Q8IYR0 622 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 FBXO39Q8N4B4 442 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 OR11H4Q8NGC9 324 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 HDAC2Q92769 488 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms