RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 SPAG6O75602 509 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 UBXN7O94888 489 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 AHSGP02765 367 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 OR56A5P0C7T3 313 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 ZNF28P17035 718 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 TYRP1P17643 537 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 XRCC1P18887 633 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 RPS3P23396 243 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■□□□ 13.9
ACTN1-206ENST00000544964 F8A1P23610 371 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 PHBP35232 272 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 STAT5AP42229 794 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 CCR10P46092 362 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 CAPZBP47756 277 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 LEPRP48357 1165 aaKnown RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 MAP7Q14244 749 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 NFE2L1Q14494 772 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 SEPT7Q16181 437 aaKnown RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 ATP1A1-AS1Q5TC04 95 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 PTRHD1Q6GMV3 140 aaKnown RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 ZNF549Q6P9A3 640 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 NAPRTQ6XQN6 538 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 FAM83HQ6ZRV2 1179 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 STRA8Q7Z7C7 330 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 PTRH1Q86Y79 214 aaKnown RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 PLXDC1Q8IUK5 500 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 CTAGE3PQ8IX95 158 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 PPM1NQ8N819 430 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 GABPB2Q8TAK5 448 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 STARD8Q92502 1023 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 RSC1A1Q92681 617 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 KIAA1143Q96AT1 154 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 MRRFQ96E11 262 aaKnown RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 RNF31Q96EP0 1072 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 ZNF514Q96K75 400 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 BIRC8Q96P09 236 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 CCM2Q9BSQ5 444 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 EPN3Q9H201 632 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 ZNF768Q9H5H4 540 aaKnown RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 POT1Q9NUX5 634 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 INTS10Q9NVR2 710 aaKnown RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 GNPTGQ9UJJ9 305 aa12.14□□□□□ -0.47
ACTN1-206ENST00000544964 MRPS18BQ9Y676 258 aaKnown RBP12.14□□□□□ -0.47
ACTN1-206ENST00000544964 MGAT4DA6NG13 374 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 OR52A4PA6NMU1 304 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 PDZK1P1A8MUH7 402 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 POLR1CO15160 346 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-206ENST00000544964 RIPK2O43353 540 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 NIPSNAP2O75323 286 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 PKMP14618 531 aaKnown RBP12.13□□□□□ -0.47
ACTN1-206ENST00000544964 MCM3P25205 808 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 RPL10P27635 214 aaKnown RBP12.13□□□□□ -0.47
ACTN1-206ENST00000544964 CD151P48509 253 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 SH3BP2P78314 561 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 BRD3Q15059 726 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 ABRAXAS1Q6UWZ7 409 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 KIAA0408Q6ZU52 694 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 CYS1Q717R9 158 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 TRMT10CQ7L0Y3 403 aaKnown RBP12.13□□□□□ -0.47
ACTN1-206ENST00000544964 PRSS42Q7Z5A4 293 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 AMZ2Q86W34 360 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 SLC26A11Q86WA9 606 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 LRRC6Q86X45 466 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 SPNS2Q8IVW8 549 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 CFAP206Q8IYR0 622 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 LILRA3Q8N6C8 439 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-206ENST00000544964 AENQ8WTP8 325 aaKnown RBP12.13□□□□□ -0.47
ACTN1-206ENST00000544964 CDKL2Q92772 493 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 FAM136AQ96C01 138 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 TGM7Q96PF1 710 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 NDNQ99608 321 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 ULBP3Q9BZM4 244 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 SLC40A1Q9NP59 571 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 GALPQ9UBC7 116 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 RAB21Q9UL25 225 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 VPS9D1Q9Y2B5 631 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 WDR37Q9Y2I8 494 aa12.13□□□□□ -0.47
ACTN1-206ENST00000544964 DNMT3AQ9Y6K1 912 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-206ENST00000544964 QSOX1O00391 747 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 TOX3O15405 576 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-206ENST00000544964 KIF1CO43896 1103 aaKnown RBP12.12□□□□□ -0.47
ACTN1-206ENST00000544964 FAM155BO75949 473 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 VIPP01282 170 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 FTH1P02794 183 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 ESR1P03372 595 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 SPTBP11277 2137 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 VCLP18206 1134 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 CCR7P32248 378 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 CSE1LP55060 971 aaKnown RBP12.12□□□□□ -0.47
ACTN1-206ENST00000544964 PPP1CAP62136 330 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 BOP1Q14137 746 aaKnown RBP12.12□□□□□ -0.47
ACTN1-206ENST00000544964 GPR18Q14330 331 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 CRTC2Q53ET0 693 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-206ENST00000544964 RBM20Q5T481 1227 aaKnown RBP12.12□□□□□ -0.47
ACTN1-206ENST00000544964 AGAP9Q5VTM2 703 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 ZNF449Q6P9G9 518 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 WASH2PQ6VEQ5 465 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 TRIM48Q8IWZ4 208 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 ESX1Q8N693 406 aa12.12□□□□□ -0.47
ACTN1-206ENST00000544964 GPATCH11Q8N954 259 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms