RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 DGKBQ9Y6T7 804 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 OR4F21O95013 312 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 UROSP10746 265 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 INHBCP55103 352 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 DMWDQ09019 674 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 KLHDC7BQ96G42 594 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 CDK15Q96Q40 435 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 NTMT1Q9BV86 223 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 WDR55Q9H6Y2 383 aaPredicted RBP29.6■■■□□ 2.33
CCM2-219ENST00000544363 MEAF6Q9HAF1 191 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 DNAJC11Q9NVH1 559 aa29.6■■■□□ 2.33
CCM2-219ENST00000544363 SPTY2D1-AS1A0A0U1RR47 76 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 CTBSQ01459 385 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 NAE1Q13564 534 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 FAM219BQ5XKK7 198 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 LETMD1Q6P1Q0 360 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 MILR1Q7Z6M3 343 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 HID1Q8IV36 788 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 OR4F6Q8NGB9 312 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 OR56A3Q8NH54 315 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 ERP27Q96DN0 273 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 INSM2Q96T92 566 aaPredicted RBP29.59■■■□□ 2.33
CCM2-219ENST00000544363 NUSAP1Q9BXS6 441 aaKnown RBP29.59■■■□□ 2.33
CCM2-219ENST00000544363 MYLK2Q9H1R3 596 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 TRIT1Q9H3H1 467 aaKnown RBP29.59■■■□□ 2.33
CCM2-219ENST00000544363 TCF7L2Q9NQB0 619 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 TRNAU1APQ9NX07 287 aaKnown RBP29.59■■■□□ 2.33
CCM2-219ENST00000544363 SLC22A14Q9Y267 594 aa29.59■■■□□ 2.33
CCM2-219ENST00000544363 CFAP20Q9Y6A4 193 aaKnown RBP29.59■■■□□ 2.33
CCM2-219ENST00000544363 MAP3K13O43283 966 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 RASGRP1O95267 797 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 EPHA3P29320 983 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 ARL1P40616 181 aaPredicted RBP29.58■■■□□ 2.33
CCM2-219ENST00000544363 UAP1L1Q3KQV9 507 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 CCDC121Q6ZUS5 278 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 ACAD11Q709F0 780 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 TBC1D21Q8IYX1 336 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 SNX31Q8N9S9 440 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 ZNF480Q8WV37 535 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 TWIST2Q8WVJ9 160 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 MAELQ96JY0 434 aaKnown RBP29.58■■■□□ 2.33
CCM2-219ENST00000544363 C12orf66Q96MD2 445 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 OR52B2Q96RD2 323 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 TMEM168Q9H0V1 697 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 ZFP69BQ9UJL9 534 aa29.58■■■□□ 2.33
CCM2-219ENST00000544363 CCDC163A0A0D9SF12 145 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 GOLGA8QA0A0J9YX86 632 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 GOLGA8OA6NCC3 632 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 PDZK1P1A8MUH7 402 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 MEI4A8MW99 385 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 GOLGA8NF8WBI6 632 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 SDHDO14521 159 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 DCXO43602 365 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 TNFP01375 233 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 EPORP19235 508 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 BCKDHBP21953 392 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 ITPKAP23677 461 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 EFL1Q7Z2Z2 1120 aaKnown RBP29.57■■■□□ 2.32
CCM2-219ENST00000544363 DCP2Q8IU60 420 aaKnown RBP29.57■■■□□ 2.32
CCM2-219ENST00000544363 DCBLD1Q8N8Z6 715 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 CCDC28BQ9BUN5 200 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 PRDM8Q9NQV8 689 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 INTS7Q9NVH2 962 aaKnown RBP29.57■■■□□ 2.32
CCM2-219ENST00000544363 TIMM22Q9Y584 194 aa29.57■■■□□ 2.32
CCM2-219ENST00000544363 FCHO1O14526 889 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 CCDC22O60826 627 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 SERPINA6P08185 405 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 EBLN1P0CF75 366 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 EIF2B5Q13144 721 aaKnown RBP29.56■■■□□ 2.32
CCM2-219ENST00000544363 FZD2Q14332 565 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 GRB7Q14451 532 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 CLCA4Q14CN2 919 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 YTHDF3Q7Z739 585 aaKnown RBP29.56■■■□□ 2.32
CCM2-219ENST00000544363 THOC6Q86W42 341 aaKnown RBP29.56■■■□□ 2.32
CCM2-219ENST00000544363 CDYL2Q8N8U2 506 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 GBP7Q8N8V2 638 aaPredicted RBP29.56■■■□□ 2.32
CCM2-219ENST00000544363 MFSD2AQ8NA29 543 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 HSPA12BQ96MM6 686 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 NMUR2Q9GZQ4 415 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 EML5Q05BV3 1969 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 LRP4O75096 1905 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 ENO1P06733 434 aaKnown RBP29.56■■■□□ 2.32
CCM2-219ENST00000544363 AK4P27144 223 aaPredicted RBP29.56■■■□□ 2.32
CCM2-219ENST00000544363 CDC16Q13042 620 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 LSM12Q3MHD2 195 aaKnown RBP29.56■■■□□ 2.32
CCM2-219ENST00000544363 TSSK4Q6SA08 328 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 CLNKQ7Z7G1 428 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 SYTL1Q8IYJ3 562 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 PPFIBP2Q8ND30 876 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 C19orf60Q96EN9 201 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 MED8Q96G25 268 aa29.56■■■□□ 2.32
CCM2-219ENST00000544363 TDRKHQ9Y2W6 561 aaKnown RBP29.56■■■□□ 2.32
CCM2-219ENST00000544363 CHEK2O96017 543 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 CD38P28907 300 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 RACK1P63244 317 aaKnown RBP29.55■■■□□ 2.32
CCM2-219ENST00000544363 PRKG2Q13237 762 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 METTL21CQ5VZV1 264 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 DUS1LQ6P1R4 473 aaKnown RBP29.55■■■□□ 2.32
CCM2-219ENST00000544363 WASH2PQ6VEQ5 465 aa29.55■■■□□ 2.32
CCM2-219ENST00000544363 CHCHD4Q8N4Q1 142 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms