RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PCMTD2Q9NV79 361 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 HRASLS2Q9NWW9 162 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 IKZF3Q9UKT9 509 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ATXN7L1Q9ULK2 861 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PDE10AQ9Y233 779 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 UQCRHLA0A096LP55 91 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GSAPA4D1B5 854 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 FAM221BA6H8Z2 402 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GOLGA8RI6L899 631 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RFPL1O75677 317 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CPNE6O95741 557 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 UQCRHP07919 91 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TPBGLP0DKB5 382 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PKLRP30613 574 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CAPZBP47756 277 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CSRP3P50461 194 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RAB28P51157 221 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ZNF844Q08AG5 666 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TSNQ15631 228 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PHKG1Q16816 387 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 FAM83EQ2M2I3 478 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 KRT71Q3SY84 523 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 KLC3Q6P597 504 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ADAMTSL2Q86TH1 951 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CENPLQ8N0S6 344 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 IQCKQ8N0W5 287 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CYP4X1Q8N118 509 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 FBXO15Q8NCQ5 510 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RSC1A1Q92681 617 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 IL17FQ96PD4 163 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RUFY1Q96T51 708 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PKP4Q99569 1192 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 UTP6Q9NYH9 597 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 EURLQ9NYK6 297 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OGFRQ9NZT2 677 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CFAP54Q96N23 3096 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OR5K3A6NET4 321 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 MYO1CO00159 1063 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NTN3O00634 580 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 KLHL2O95198 593 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GUCA1CO95843 209 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ENO2P09104 434 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 H2AFXP16104 143 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 POLR2CP19387 275 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TFEBP19484 476 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GLRBP48167 497 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 INSM1Q01101 510 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 DLG1Q12959 904 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GRB7Q14451 532 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CASP8Q14790 479 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CEP85LQ5SZL2 805 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 IRGCQ6NXR0 463 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 FBXO38Q6PIJ6 1188 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SBSNQ6UWP8 590 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TAX1BP1Q86VP1 789 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PLXDC1Q8IUK5 500 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RASGRP3Q8IV61 690 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 C2orf73Q8N5S3 287 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 MZB1Q8WU39 189 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ZBTB9Q96C00 473 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CCDC138Q96M89 665 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NUDT22Q9BRQ3 303 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TMEM109Q9BVC6 243 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CENPHQ9H3R5 247 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ALG9Q9H6U8 611 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 IGSF5Q9NSI5 407 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ARL15Q9NXU5 204 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OR6C2Q9NZP2 312 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SPATA7Q9P0W8 599 aa14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NOVA2Q9UNW9 492 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1A-216ENST00000543995 A0A1W2PPM1 405 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PIPSLA2A3N6 862 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 FOXO6A8MYZ6 492 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 D6RAR5 112 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 BTN3A3O00478 584 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CAPN5O15484 640 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 DKK1O94907 266 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SLC16A8O95907 504 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PYGBP11216 843 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 COL6A2P12110 1019 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CSF2RBP32927 897 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 HSD17B2P37059 387 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CLDN6P56747 220 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TSTA3Q13630 321 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ACAP2Q15057 778 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CLPPQ16740 277 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 HES3Q5TGS1 186 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ANKS6Q68DC2 871 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 WDR74Q6RFH5 385 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 LRIG3Q6UXM1 1119 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 MBOAT1Q6ZNC8 495 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RBM44Q6ZP01 1051 aaKnown RBP14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CROCCP2Q86T23 111 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SYTL1Q8IYJ3 562 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PLD6Q8N2A8 252 aaKnown RBP14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OR2L8Q8NGY9 312 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 STAG3L4Q8TBR4 150 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ACMSDQ8TDX5 336 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 EXT2Q93063 718 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms