RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 PLAAQ9Y263 795 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 ACOT9Q9Y305 439 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 KNTC1P50748 2209 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 ANKRD12Q6UB98 2062 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 FAM221BA6H8Z2 402 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 MYO1CO00159 1063 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 CDC7O00311 574 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 BTN3A1O00481 513 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 RASGRF2O14827 1237 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 MT-CO3P00414 261 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 HOXB3P14651 431 aaPredicted RBP13.21□□□□□ -0.29
SP140-213ENST00000543928 CD1DP15813 335 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 POLR2CP19387 275 aaPredicted RBP13.21□□□□□ -0.29
SP140-213ENST00000543928 SLC26A3P40879 764 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 ATP6V0D1P61421 351 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 IRF9Q00978 393 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 PHKG1Q16816 387 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 BEND6Q5SZJ8 279 aaPredicted RBP13.21□□□□□ -0.29
SP140-213ENST00000543928 ARMC6Q6NXE6 501 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 IRGCQ6NXR0 463 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 WDR74Q6RFH5 385 aaPredicted RBP13.21□□□□□ -0.29
SP140-213ENST00000543928 ZNF574Q6ZN55 896 aaPredicted RBP13.21□□□□□ -0.29
SP140-213ENST00000543928 CCDC91Q7Z6B0 441 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.29
SP140-213ENST00000543928 ADGRF3Q8IZF5 1079 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 CHCHD4Q8N4Q1 142 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 LMNTD1Q8N9Z9 388 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 MCOLN3Q8TDD5 553 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 KCTD4Q8WVF5 259 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 ANKRD7Q92527 254 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 PKP4Q99569 1192 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 DPYSL5Q9BPU6 564 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 RAB11FIP5Q9BXF6 653 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 VPS11Q9H270 941 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 PARVBQ9HBI1 364 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 IGSF5Q9NSI5 407 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 OR6C2Q9NZP2 312 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 TMEM9Q9P0T7 183 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.21□□□□□ -0.29
SP140-213ENST00000543928 LNPEPQ9UIQ6 1025 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 CLCA2Q9UQC9 943 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 PDE10AQ9Y233 779 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 SPEGQ15772 3267 aa13.21□□□□□ -0.29
SP140-213ENST00000543928 TLDC2A0PJX2 215 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 GSAPA4D1B5 854 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 CAPN5O15484 640 aaPredicted RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 CDH16O75309 829 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 CSO75390 466 aaKnown RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 RFPL1O75677 317 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 MPOP05164 745 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 CHRM5P08912 532 aaPredicted RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 ENO2P09104 434 aaPredicted RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 LTA4HP09960 611 aaKnown RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 HIST1H2AGP0C0S8 130 aaPredicted RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 JUPP14923 745 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 HIST1H2ADP20671 130 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 MPSTP25325 297 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 PDX1P52945 283 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 GFERP55789 205 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 PPP1CAP62136 330 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 DLG1Q12959 904 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 PRKAA1Q13131 559 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 RASA2Q15283 850 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 TSNQ15631 228 aaKnown RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 TMEM71Q6P5X7 295 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 SBSNQ6UWP8 590 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 TIFABQ6ZNK6 161 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 B3GNT8Q7Z7M8 397 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 ADAMTSL2Q86TH1 951 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 TMPRSS12Q86WS5 348 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 PLXDC1Q8IUK5 500 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 SLITRK4Q8IW52 837 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 CENPLQ8N0S6 344 aaPredicted RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 CNPY4Q8N129 248 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 RAB42Q8N4Z0 105 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 C2orf73Q8N5S3 287 aaPredicted RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 LINC01555Q8NAE3 123 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 OR4D9Q8NGE8 314 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 OR2L8Q8NGY9 312 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 DENND1AQ8TEH3 1009 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 MZB1Q8WU39 189 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 HNRNPLLQ8WVV9 542 aaKnown RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 NXNL1Q96CM4 212 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 HIST1H2AHQ96KK5 128 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 TGM7Q96PF1 710 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 DEPDC7Q96QD5 511 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 HIST1H2AJQ99878 128 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 H2AFJQ9BTM1 129 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 TRIM54Q9BYV2 358 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 ROPN1BQ9BZX4 212 aaPredicted RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 RAB33BQ9H082 229 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 SEMA6CQ9H3T2 930 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 ROPN1Q9HAT0 212 aaPredicted RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 NMRAL1Q9HBL8 299 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 EURLQ9NYK6 297 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 SPATA7Q9P0W8 599 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 EPHA6Q9UF33 1036 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 KLHL3Q9UH77 587 aa13.2□□□□□ -0.3
SP140-213ENST00000543928 NOVA2Q9UNW9 492 aaKnown RBP13.2□□□□□ -0.3
SP140-213ENST00000543928 COL27A1Q8IZC6 1860 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms