RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 GSDMCQ9BYG8 508 aa19■□□□□ 0.63
SUDS3-204ENST00000543473 XRN2Q9H0D6 950 aaKnown RBP eCLIP19■□□□□ 0.63
SUDS3-204ENST00000543473 RNF6Q9Y252 685 aa19■□□□□ 0.63
SUDS3-204ENST00000543473 PDE4DIPQ5VU43 2346 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 GSAPA4D1B5 854 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 NIPSNAP2O75323 286 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 ARL4DP49703 201 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 NFATC3Q12968 1075 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 TMEM236Q5W0B7 351 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 OR1D2P34982 312 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 CLCNKBP51801 687 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 MS4A2Q01362 244 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 DPY19L1Q2PZI1 675 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 RFTN2Q52LD8 501 aaPredicted RBP18.99■□□□□ 0.63
SUDS3-204ENST00000543473 SERPINA9Q86WD7 417 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 CIR1Q86X95 450 aaPredicted RBP18.99■□□□□ 0.63
SUDS3-204ENST00000543473 ITPKCQ96DU7 683 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 CRELD1Q96HD1 420 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 ACAT2Q9BWD1 397 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 MMP27Q9H306 513 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 TAS2R7Q9NYW3 318 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 IRAK3Q9Y616 596 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 FFAR2O15552 330 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 CREG1O75629 220 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 SLC15A3Q8IY34 581 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 OR10Q1Q8NGQ4 319 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 HAPLN3Q96S86 360 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 TBC1D17Q9HA65 648 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 NMUR1Q9HB89 426 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 RAD18Q9NS91 495 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 SIX4Q9UIU6 781 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 ZNF487B1APH4 448 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 FPR1P21462 350 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 ZNF678Q5SXM1 525 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 NANOGP8Q6NSW7 305 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 ATAD1Q8NBU5 361 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 NANOGQ9H9S0 305 aa18.99■□□□□ 0.63
SUDS3-204ENST00000543473 GOLGA4Q13439 2230 aaKnown RBP18.98■□□□□ 0.63
SUDS3-204ENST00000543473 CLIC1O00299 241 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 C1RP00736 705 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 G6PDP11413 515 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 PIGFQ07326 219 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 SLAIN1Q8ND83 568 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 FCRL4Q96PJ5 515 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 ACBD6Q9BR61 282 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 DHRS7Q9Y394 339 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 CHRM1P11229 460 aaPredicted RBP18.98■□□□□ 0.63
SUDS3-204ENST00000543473 PTGS2P35354 604 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 RELAQ04206 551 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 SCML4Q8N228 414 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 CDKN2AIPNLQ96HQ2 116 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 MINDY3Q9H8M7 445 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 ZSCAN32Q9NX65 697 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 TVP23BQ9NYZ1 205 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 RLN1P04808 185 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 SMU1Q2TAY7 513 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 WSCD2Q2TBF2 565 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 ZNF697Q5TEC3 545 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 CAPN13Q6MZZ7 669 aaPredicted RBP18.98■□□□□ 0.63
SUDS3-204ENST00000543473 HFE2Q6ZVN8 426 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 B3GALT6Q96L58 329 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 PHOX2BQ99453 314 aa18.98■□□□□ 0.63
SUDS3-204ENST00000543473 CDC7O00311 574 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 DNAJB5O75953 348 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 FGBP02675 491 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 GALNT2Q10471 571 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 TAF1AQ15573 450 aaPredicted RBP18.97■□□□□ 0.63
SUDS3-204ENST00000543473 ZNF730Q6ZMV8 503 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 METTL3Q86U44 580 aaKnown RBP18.97■□□□□ 0.63
SUDS3-204ENST00000543473 PYURFQ96I23 114 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 SLC30A2Q9BRI3 323 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 NFKBIL1Q9UBC1 381 aaPredicted RBP18.97■□□□□ 0.63
SUDS3-204ENST00000543473 RPL36Q9Y3U8 105 aaKnown RBP18.97■□□□□ 0.63
SUDS3-204ENST00000543473 PRORSD1PA6NEY8 169 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 IRAK2O43187 625 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 DIRAS1O95057 198 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 NPPAP01160 153 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 CD72P21854 359 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 SLC10A7Q0GE19 358 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 PMS2P3Q13401 168 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 ZBTB6Q15916 424 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 FBXL19Q6PCT2 694 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 LINGO4Q6UY18 593 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 LGI4Q8N135 537 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 TSPEARQ8WU66 669 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 TTPALQ9BTX7 342 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 MAGEH1Q9H213 219 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 ITM2CQ9NQX7 267 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 PHF11Q9UIL8 331 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 C4BP0C0L5 1744 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 OR6C75A6NL08 312 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 NME6O75414 186 aaPredicted RBP18.97■□□□□ 0.63
SUDS3-204ENST00000543473 CCNDBP1O95273 360 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 SPAM1P38567 509 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 SLC15A4Q8N697 577 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 NPLOC4Q8TAT6 608 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 MAPK15Q8TD08 544 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 DUSP26Q9BV47 211 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 GPN1Q9HCN4 374 aaPredicted RBP18.97■□□□□ 0.63
SUDS3-204ENST00000543473 LAMB4A4D0S4 1761 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms