RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 RP9Q8TA86 221 aaKnown RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 FOXJ1Q92949 421 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 MAGEB10Q96LZ2 347 aaPredicted RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 CDK15Q96Q40 435 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 SLC29A3Q9BZD2 475 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 OSBPL6Q9BZF3 934 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 RIC8BQ9NVN3 520 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 BAIAP2L1Q9UHR4 511 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 PTGDR2Q9Y5Y4 395 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 SPTBN5Q9NRC6 3674 aaKnown RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 ZFC3H1O60293 1989 aaKnown RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 TBC1D3DA0A087WVF3 549 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 TBC1D3IA0A087WXS9 549 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 TBC1D3EA0A087X179 549 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 TBC1D3KA0A087X1G2 549 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 DPPA5A6NC42 116 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 TBC1D3FA6NER0 549 aaPredicted RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 TBC1D3LB9A6J9 549 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 KMOO15229 486 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 C1orf105O95561 183 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 HOXC4P09017 264 aaPredicted RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 TBC1D3HP0C7X1 549 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 LINC00032P0C843 101 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 LBPP18428 481 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 GABRG2P18507 467 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 EPORP19235 508 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 BDKRB1P46663 353 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 PPP2CBP62714 309 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 PPP2CAP67775 309 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 TBC1D3GQ6DHY5 549 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 TBC1D3CQ6IPX1 549 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 GPR153Q6NV75 609 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 ZNF852Q6ZMS4 543 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 SPATA19Q7Z5L4 167 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 AMZ2Q86W34 360 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 LONP2Q86WA8 852 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 TBC1D3Q8IZP1 549 aaPredicted RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 ZNF687Q8N1G0 1237 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 SYNPOQ8N3V7 929 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 RBM15BQ8NDT2 890 aaKnown RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 METTL6Q8TCB7 284 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 MARK4Q96L34 752 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 RTKNQ9BST9 563 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 CADM1Q9BY67 442 aaKnown RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 OR52A5Q9H2C5 316 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 DNAJC11Q9NVH1 559 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 PCYT1BQ9Y5K3 369 aaPredicted RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 ATP6AP2A0A1C7CYW4 349 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 PRR23AA6NEV1 266 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 CHURC1-FNTBB4DL54 471 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 C10orf142B7Z368 130 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 GSC2O15499 205 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 ATP6AP2O75787 350 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 CLDN9O95484 217 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 ACADLP28330 430 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 HMOX2P30519 316 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 PRKCQQ04759 706 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 DMPKQ09013 629 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 NFE2L1Q14494 772 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 MAPRE2Q15555 327 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 PTCHD3Q3KNS1 767 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 PLA2G4EQ3MJ16 856 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 FAM83HQ6ZRV2 1179 aaPredicted RBP9.08□□□□□ -0.96
GNE-206ENST00000543356 PDZD3Q86UT5 571 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 POU5F2Q8N7G0 328 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 SNX31Q8N9S9 440 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 OR2T34Q8NGX1 318 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 CFAP61Q8NHU2 1237 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 C17orf50Q8WW18 174 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 KLK6Q92876 244 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 TUBGCP3Q96CW5 907 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 GUCD1Q96NT3 240 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 SGK2Q9HBY8 427 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 STOX2Q9P2F5 926 aaPredicted RBP9.08□□□□□ -0.96
GNE-206ENST00000543356 SLC17A4Q9Y2C5 497 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 OR1A2Q9Y585 309 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 TRPM6Q9BX84 2022 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 PEX14O75381 377 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 IGLV3-19P01714 112 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 ALDOCP09972 364 aaKnown RBP9.08□□□□□ -0.96
GNE-206ENST00000543356 CHRNB1P11230 501 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 CPOXP36551 454 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 ARL1P40616 181 aaPredicted RBP9.08□□□□□ -0.96
GNE-206ENST00000543356 ACADVLP49748 655 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 TPMTP51580 245 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 KIAA1024LP59773 190 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 PFN3P60673 137 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 STX1BP61266 288 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 LRRC32Q14392 662 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 GSTA3Q16772 222 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 HABP4Q5JVS0 413 aaKnown RBP9.08□□□□□ -0.96
GNE-206ENST00000543356 SNX32Q86XE0 403 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 ARHGAP24Q8N264 748 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 FBXO27Q8NI29 283 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 SLC35B4Q969S0 331 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 PKP4Q99569 1192 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 TIMM29Q9BSF4 260 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 POLMQ9NP87 494 aaPredicted RBP9.08□□□□□ -0.96
GNE-206ENST00000543356 ITM2CQ9NQX7 267 aa9.08□□□□□ -0.96
GNE-206ENST00000543356 USP36Q9P275 1121 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms