RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 CDC6Q99741 560 aa20.19■□□□□ 0.82
OTUB1-211ENST00000543004 TFB2MQ9H5Q4 396 aaKnown RBP20.19■□□□□ 0.82
OTUB1-211ENST00000543004 TOR4AQ9NXH8 423 aa20.19■□□□□ 0.82
OTUB1-211ENST00000543004 KCNK4Q9NYG8 393 aa20.19■□□□□ 0.82
OTUB1-211ENST00000543004 OGFRQ9NZT2 677 aa20.19■□□□□ 0.82
OTUB1-211ENST00000543004 SNRNP200O75643 2136 aaKnown RBP20.19■□□□□ 0.82
OTUB1-211ENST00000543004 CNOT1A5YKK6 2376 aaKnown RBP20.18■□□□□ 0.82
OTUB1-211ENST00000543004 SPAARA0A1B0GVQ0 90 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 SLC30A4O14863 429 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 TNFSF14O43557 240 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 SLC16A8O95907 504 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 COL6A2P12110 1019 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 DUSP3P51452 185 aaPredicted RBP20.18■□□□□ 0.82
OTUB1-211ENST00000543004 FASTKQ14296 549 aaKnown RBP20.18■□□□□ 0.82
OTUB1-211ENST00000543004 NR1D2Q14995 579 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 ACAP2Q15057 778 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 RSPO4Q2I0M5 234 aaPredicted RBP20.18■□□□□ 0.82
OTUB1-211ENST00000543004 AMZ1Q400G9 498 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 FBXO48Q5FWF7 155 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 TECRLQ5HYJ1 363 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 TTC23LQ6PF05 361 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 ADAMTSL2Q86TH1 951 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 TAX1BP1Q86VP1 789 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 RBM12BQ8IXT5 1001 aaKnown RBP20.18■□□□□ 0.82
OTUB1-211ENST00000543004 LINC01555Q8NAE3 123 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 AVL9Q8NBF6 648 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 FBXO15Q8NCQ5 510 aaPredicted RBP20.18■□□□□ 0.82
OTUB1-211ENST00000543004 MCOLN3Q8TDD5 553 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 NAT6Q93015 286 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 SH3KBP1Q96B97 665 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 SCYL1Q96KG9 808 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 CPSF2Q9P2I0 782 aaKnown RBP20.18■□□□□ 0.82
OTUB1-211ENST00000543004 XPR1Q9UBH6 696 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 CDV3Q9UKY7 258 aaKnown RBP20.18■□□□□ 0.82
OTUB1-211ENST00000543004 EMCNQ9ULC0 261 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 RNF112Q9ULX5 631 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 OARD1Q9Y530 152 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 PCM1Q15154 2024 aa20.18■□□□□ 0.82
OTUB1-211ENST00000543004 IGHV1OR21-1A0A087WYE8 117 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 LILRA5A6NI73 299 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 TK2O00142 265 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 BTN3A3O00478 584 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 SBK3P0C264 359 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 PPP1CAP62136 330 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 TGFBIQ15582 683 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 C18orf21Q32NC0 220 aaPredicted RBP20.17■□□□□ 0.82
OTUB1-211ENST00000543004 FRA10AC1Q70Z53 315 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 CROCCP2Q86T23 111 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 AMIGO1Q86WK6 493 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 GPSM1Q86YR5 675 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 TMEM151AQ8N4L1 468 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 BANPQ8N9N5 519 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 OR6C4Q8NGE1 309 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 STAG3L4Q8TBR4 150 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 MAGEC3Q8TD91 643 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 ZNF480Q8WV37 535 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 ZFPM2Q8WW38 1151 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.17■□□□□ 0.82
OTUB1-211ENST00000543004 UCK1Q9HA47 277 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 RDH14Q9HBH5 336 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 ARL15Q9NXU5 204 aa20.17■□□□□ 0.82
OTUB1-211ENST00000543004 NOVA2Q9UNW9 492 aaKnown RBP20.17■□□□□ 0.82
OTUB1-211ENST00000543004 A0A1W2PQM1 296 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 OR6C74A6NCV1 312 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 UBXN8O00124 270 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 UBXN7O94888 489 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 PNLIPP16233 465 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 IMPA1P29218 277 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 PKLRP30613 574 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 CCL7P80098 99 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 CFHR1Q03591 330 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 N4BP2L1Q5TBK1 243 aaPredicted RBP20.16■□□□□ 0.82
OTUB1-211ENST00000543004 KLC3Q6P597 504 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 USP53Q70EK8 1073 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 OR10G6Q8NH81 332 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 SRMSQ9H3Y6 488 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 SPHK1Q9NYA1 384 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 STOX2Q9P2F5 926 aaPredicted RBP20.16■□□□□ 0.82
OTUB1-211ENST00000543004 ATXN7L1Q9ULK2 861 aaPredicted RBP20.16■□□□□ 0.82
OTUB1-211ENST00000543004 COL27A1Q8IZC6 1860 aaPredicted RBP20.16■□□□□ 0.82
OTUB1-211ENST00000543004 GOLGA6L10A6NI86 522 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 COPEO14579 308 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 KERAO60938 352 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 RPLP0P05388 317 aaKnown RBP20.16■□□□□ 0.82
OTUB1-211ENST00000543004 HIST1H2AGP0C0S8 130 aaPredicted RBP20.16■□□□□ 0.82
OTUB1-211ENST00000543004 MTHFD2P13995 350 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 HIST1H2ADP20671 130 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 CD1CP29017 333 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 GPR3P46089 330 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 PPM1FP49593 454 aaPredicted RBP20.16■□□□□ 0.82
OTUB1-211ENST00000543004 RAB28P51157 221 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 TSNAXIP1Q2TAA8 658 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 TMPRSS9Q7Z410 1059 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 SLCO6A1Q86UG4 719 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 ADGRF3Q8IZF5 1079 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 RHEBL1Q8TAI7 183 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 HIST1H2AHQ96KK5 128 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 TSNARE1Q96NA8 513 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 SMC6Q96SB8 1091 aa20.16■□□□□ 0.82
OTUB1-211ENST00000543004 HIST1H2AJQ99878 128 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms