RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 HIPK3Q9H422 1215 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 EXO5Q9H790 373 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 SLC17A6Q9P2U8 582 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 COMMD3Q9UBI1 195 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 PCDHGB7Q9Y5F8 929 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 MATN4O95460 622 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 PRAMEF12O95522 483 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 GRIA1P42261 906 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 PSMD8P48556 350 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 RHDQ02161 417 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 MADCAM1Q13477 382 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 SOWAHAQ2M3V2 549 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 GPALPP1Q8IXQ4 340 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 FATE1Q969F0 183 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 MIR1-1HGQ9H1L0 117 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 OSER1Q9NX31 292 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 LRRC42Q9Y546 428 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 A0A1W2PRB8 838 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 SOWAHBA6NEL2 793 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 ANXA2P2A6NMY6 339 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 MID1O15344 667 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 PCDH7O60245 1069 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 DLX3O60479 287 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 ANXA2P07355 339 aaKnown RBP12.86□□□□□ -0.35
TNC-212ENST00000542877 PIK3CBP42338 1070 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 PPP3R1P63098 170 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 RUNDC3AQ59EK9 446 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 RGMBQ6NW40 437 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 EFHD2Q96C19 240 aaPredicted RBP12.86□□□□□ -0.35
TNC-212ENST00000542877 FARSBQ9NSD9 589 aaKnown RBP12.86□□□□□ -0.35
TNC-212ENST00000542877 POFUT2Q9Y2G5 429 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 DAPL1A0PJW8 107 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 DUSP11O75319 330 aaKnown RBP12.86□□□□□ -0.35
TNC-212ENST00000542877 ECI2O75521 394 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 HLA-DQB2P05538 268 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 TUBA1BP68363 451 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 SLC10A7Q0GE19 358 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 UBXN11Q5T124 520 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 UBAP2Q5T6F2 1119 aaKnown RBP12.86□□□□□ -0.35
TNC-212ENST00000542877 CLEC20AQ6ZU45 233 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 TUBA1AQ71U36 451 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 FBXL18Q96ME1 805 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 KCTD7Q96MP8 289 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 ZDHHC2Q9UIJ5 367 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 SLC38A8A6NNN8 435 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 H3BSA7 217 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 PDLIM1O00151 329 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 HMGN1P05114 100 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 IL7RP16871 459 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 VARSP26640 1264 aaKnown RBP12.85□□□□□ -0.35
TNC-212ENST00000542877 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
TNC-212ENST00000542877 COLEC12Q5KU26 742 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 C6orf89Q6UWU4 347 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 PAMR1Q6UXH9 720 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 FAM124AQ86V42 546 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 ZC3HC1Q86WB0 502 aaKnown RBP12.85□□□□□ -0.35
TNC-212ENST00000542877 TMEM126BQ8IUX1 230 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 KLHL36Q8N4N3 616 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 OR13C4Q8NGS5 318 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 DMRTB1Q96MA1 342 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 CLCC1Q96S66 551 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 PKP2Q99959 881 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 IFT27Q9BW83 186 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 ITPAQ9BY32 194 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 TCF7L1Q9HCS4 588 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 MSRAQ9UJ68 235 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 SPIN1Q9Y657 262 aaPredicted RBP12.85□□□□□ -0.35
TNC-212ENST00000542877 TEX46H3BTG2 121 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 CLIC1O00299 241 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 PCCBP05166 539 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 ALPPP05187 535 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 CD2P06729 351 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 FAM163BP0C2L3 166 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 PSKH1P11801 424 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 EFNA1P20827 205 aaPredicted RBP12.85□□□□□ -0.35
TNC-212ENST00000542877 ACSL1P33121 698 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 DSC3Q14574 896 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 THOC7Q6I9Y2 204 aaKnown RBP12.85□□□□□ -0.35
TNC-212ENST00000542877 OR2T5Q6IEZ7 315 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 ERMP1Q7Z2K6 904 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 OR2T29Q8NH02 315 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 WRAP53Q9BUR4 548 aaKnown RBP12.85□□□□□ -0.35
TNC-212ENST00000542877 USP29Q9HBJ7 922 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 ZBTB26Q9HCK0 441 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 FLRT1Q9NZU1 646 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 TMEM9Q9P0T7 183 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 M0R2N6 131 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 BCAS2O75934 225 aaPredicted RBP12.85□□□□□ -0.35
TNC-212ENST00000542877 GSK3BP49841 420 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 XKP51811 444 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 BNIP3Q12983 259 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 QSOX2Q6ZRP7 698 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 LGI4Q8N135 537 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 MTERF1Q99551 399 aaKnown RBP12.85□□□□□ -0.35
TNC-212ENST00000542877 GPR22Q99680 433 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 VPS29Q9UBQ0 182 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 NR2E3Q9Y5X4 410 aa12.85□□□□□ -0.35
TNC-212ENST00000542877 ATP6V1G1O75348 118 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms