RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 ZFP37Q9Y6Q3 630 aaPredicted RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 ULK1O75385 1050 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 FADS2O95864 444 aaKnown RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 MT-ND2P03891 347 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 GSNP06396 782 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 ACVR2AP27037 513 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 CLK3P49761 638 aaKnown RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 ST13P50502 369 aaKnown RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 SLC35A2P78381 396 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 RING1Q06587 406 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 CCDC92Q53HC0 331 aaPredicted RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 CPZQ66K79 652 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 PTRHD1Q6GMV3 140 aaKnown RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 SHQ1Q6PI26 577 aaKnown RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 SLC22A16Q86VW1 577 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 GALNT13Q8IUC8 556 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 CHPFQ8IZ52 775 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 STK40Q8N2I9 435 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 ZNF540Q8NDQ6 660 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 ZNF300Q96RE9 604 aaPredicted RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 ADGRE3Q9BY15 652 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 P2RY12Q9H244 342 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 POLE4Q9NR33 117 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 WWOXQ9NZC7 414 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 PRG3Q9Y2Y8 225 aaPredicted RBP12.65□□□□□ -0.38
DDX11-223ENST00000542838 GMPPBQ9Y5P6 360 aa12.65□□□□□ -0.38
DDX11-223ENST00000542838 KDELR3O43731 214 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 SEC24AO95486 1093 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 OR1G1P47890 313 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 MASP1P48740 699 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 FPGSQ05932 587 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 CARD16Q5EG05 197 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 SYT6Q5T7P8 510 aaPredicted RBP12.64□□□□□ -0.39
DDX11-223ENST00000542838 CALHM3Q86XJ0 350 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 RGL4Q8IZJ4 473 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 CARNMT1Q8N4J0 409 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 PHF10Q8WUB8 498 aaKnown RBP12.64□□□□□ -0.39
DDX11-223ENST00000542838 MTFMTQ96DP5 389 aaKnown RBP12.64□□□□□ -0.39
DDX11-223ENST00000542838 CPPED1Q9BRF8 314 aaPredicted RBP12.64□□□□□ -0.39
DDX11-223ENST00000542838 DUSP21Q9H596 190 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 OPTCQ9UBM4 332 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 TSC22D4Q9Y3Q8 395 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 TRBV5-3A0A0A0MS03 114 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 MYO1GB0I1T2 1018 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 CBX4O00257 560 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 AREL1O15033 823 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
DDX11-223ENST00000542838 ZNF682O95780 498 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 JUNDP17535 347 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 DAPP51397 102 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 RPS24P62847 133 aaKnown RBP12.64□□□□□ -0.39
DDX11-223ENST00000542838 SMU1Q2TAY7 513 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 SPRYD7Q5W111 196 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 PAGE2Q7Z2X7 111 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 CHCHD4Q8N4Q1 142 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 SCAIQ8N9R8 606 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 CCDC97Q96F63 343 aaPredicted RBP12.64□□□□□ -0.39
DDX11-223ENST00000542838 RHNO1Q9BSD3 238 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 FAM126AQ9BYI3 521 aaPredicted RBP12.64□□□□□ -0.39
DDX11-223ENST00000542838 CIPCQ9C0C6 399 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 ZNF229Q9UJW7 825 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 ZNF232Q9UNY5 417 aa12.64□□□□□ -0.39
DDX11-223ENST00000542838 GOLGA8CPA6NN73 597 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 TLR5O60602 858 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 ERN1O75460 977 aaKnown RBP12.63□□□□□ -0.39
DDX11-223ENST00000542838 GLUD1P00367 558 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 GRK3P35626 688 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 GZMMP51124 257 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 ARHGDIAP52565 204 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 PHC1P78364 1004 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 CEP68Q76N32 757 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 PLPP6Q8IY26 295 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 TMEM132CQ8N3T6 1108 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 ULK4Q96C45 1275 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 DACH2Q96NX9 599 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 PNMA8BQ9ULN7 279 aaPredicted RBP12.63□□□□□ -0.39
DDX11-223ENST00000542838 TTC34A8MYJ7 566 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 H7C0S8 307 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 PER2O15055 1255 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 RGS10O43665 173 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 ACSL4O60488 711 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 FAM20BO75063 409 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 GSTT2P0CG29 244 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 GSTT2BP0CG30 244 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 IL1RNP18510 177 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 MAGEA11P43364 429 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 CACNG1Q06432 222 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 KEAP1Q14145 624 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 SMN1Q16637 294 aaKnown RBP12.63□□□□□ -0.39
DDX11-223ENST00000542838 CTXN3Q4LDR2 81 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 USP39Q53GS9 565 aaKnown RBP12.63□□□□□ -0.39
DDX11-223ENST00000542838 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
DDX11-223ENST00000542838 ANKRD46Q86W74 232 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 PLD3Q8IV08 490 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 SVOPQ8N4V2 548 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 SEPT5Q99719 369 aaPredicted RBP12.63□□□□□ -0.39
DDX11-223ENST00000542838 BTBD2Q9BX70 525 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 CD244Q9BZW8 370 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 OARD1Q9Y530 152 aa12.63□□□□□ -0.39
DDX11-223ENST00000542838 PCDHB1Q9Y5F3 818 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms