RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ASPSCR1Q9BZE9 553 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 AKIRIN1Q9H9L7 192 aaPredicted RBP9.42□□□□□ -0.9
YBX3-212ENST00000542002 FAM60AQ9NP50 221 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 SMYD2Q9NRG4 433 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 KLHL20Q9Y2M5 609 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 DHRS7Q9Y394 339 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 MRFAP1Q9Y605 127 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 PIPSLA2A3N6 862 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 CXorf49A8MYA2 514 aaPredicted RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 PFDN6O15212 129 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 PRICKLE3O43900 615 aaPredicted RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 ZBTB11O95625 1053 aaPredicted RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 C1QAP02745 245 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 LIPCP11150 499 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 UGT2B7P16662 529 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 CD9P21926 228 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 SSTR1P30872 391 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 SHMT2P34897 504 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 PLTPP55058 493 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 RAB15P59190 212 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 GPX6P59796 221 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 FASTKQ14296 549 aaKnown RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 FRG1Q14331 258 aaKnown RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 IL11RAQ14626 422 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 TMEM164Q5U3C3 297 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 PRAMEF17Q5VTA0 474 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 ARMC6Q6NXE6 501 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 SPESP1Q6UW49 350 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 CAPN12Q6ZSI9 719 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 ZBED8Q8IZ13 594 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 SLC38A9Q8NBW4 561 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 BBOF1Q8ND07 529 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 FBXO25Q8TCJ0 367 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 CD200R1Q8TD46 325 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 CALML6Q8TD86 181 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 EEF1AKMT1Q8WVE0 214 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 SKA2Q8WVK7 121 aaPredicted RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 ASB11Q8WXH4 323 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 SEC14L1Q92503 715 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 DLG3Q92796 817 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 KCNJ9Q92806 393 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 INPP5DQ92835 1189 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 ZNF501Q96CX3 271 aaPredicted RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 CD180Q99467 661 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 MCMBPQ9BTE3 642 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 SAYSD1Q9NPB0 183 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 PPANQ9NQ55 473 aaKnown RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 C1GALT1Q9NS00 363 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 OR6C2Q9NZP2 312 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 KLHL42Q9P2K6 505 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 LHX6Q9UPM6 363 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 BTRCQ9Y297 605 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 VPS9D1Q9Y2B5 631 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 UTP11Q9Y3A2 253 aaKnown RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 TMEM184BQ9Y519 407 aaPredicted RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 ANKRD11Q6UB99 2663 aaPredicted RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 PKD1L2Q7Z442 2459 aa9.41□□□□□ -0.9
YBX3-212ENST00000542002 SMG1Q96Q15 3661 aaKnown RBP9.41□□□□□ -0.9
YBX3-212ENST00000542002 LOC101059948A0A1B0GTJ6 334 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 A0A1W2PPV9 198 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 ARHGEF33A8MVX0 844 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 C2orf74A8MZ97 194 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 E5RI56 91 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 STMND1H3BQB6 276 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 GFYI3L273 518 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 RASGRF2O14827 1237 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 PSIP1O75475 530 aaKnown RBP9.4□□□□□ -0.9
YBX3-212ENST00000542002 SPAG6O75602 509 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 STK17BO94768 372 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 DLGAP3O95886 979 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 CDH3P22223 829 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 F8A1P23610 371 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 MCM3P25205 808 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 CD82P27701 267 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 ATP5DP30049 168 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 GABRA4P48169 554 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 RAB28P51157 221 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 CXADRP78310 365 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 PRKAA1Q13131 559 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 CALCOCO2Q13137 446 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 TUBB3Q13509 450 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 TMED2Q15363 201 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 WHAMMP3Q1A5X7 153 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 UBAP2Q5T6F2 1119 aaKnown RBP9.4□□□□□ -0.9
YBX3-212ENST00000542002 ARHGAP40Q5TG30 622 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 PAQR3Q6TCH7 311 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 TMEM207Q6UWW9 146 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 CEACAM20Q6UY09 585 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 CDHR3Q6ZTQ4 885 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 KIAA0408Q6ZU52 694 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 PIWIL4Q7Z3Z4 852 aaKnown RBP9.4□□□□□ -0.9
YBX3-212ENST00000542002 TAX1BP1Q86VP1 789 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 KMT5CQ86Y97 462 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 DCUN1D3Q8IWE4 304 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 CPNE9Q8IYJ1 553 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 MMGT1Q8N4V1 131 aa9.4□□□□□ -0.9
YBX3-212ENST00000542002 TEFMQ96QE5 360 aaKnown RBP9.4□□□□□ -0.9
YBX3-212ENST00000542002 CCNL2Q96S94 520 aaPredicted RBP9.4□□□□□ -0.9
YBX3-212ENST00000542002 OLFM1Q99784 485 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms