RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PIM1P11309 404 aaPredicted RBP25.8■■□□□ 1.72
CHFR-218ENST00000540963 ZNF169Q14929 603 aaPredicted RBP25.8■■□□□ 1.72
CHFR-218ENST00000540963 DNAJB14Q8TBM8 379 aa25.8■■□□□ 1.72
CHFR-218ENST00000540963 HAUS1Q96CS2 278 aa25.8■■□□□ 1.72
CHFR-218ENST00000540963 CCDC42Q96M95 316 aa25.8■■□□□ 1.72
CHFR-218ENST00000540963 MRM3Q9HC36 420 aaKnown RBP25.8■■□□□ 1.72
CHFR-218ENST00000540963 SLC6A20Q9NP91 592 aa25.8■■□□□ 1.72
CHFR-218ENST00000540963 SPTLC3Q9NUV7 552 aa25.8■■□□□ 1.72
CHFR-218ENST00000540963 FBXL4Q9UKA2 621 aa25.8■■□□□ 1.72
CHFR-218ENST00000540963 CSAG2Q9Y5P2 127 aa25.8■■□□□ 1.72
CHFR-218ENST00000540963 ANKRD17O75179 2603 aaKnown RBP25.79■■□□□ 1.72
CHFR-218ENST00000540963 APOC4-APOC2K7ER74 178 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 QSOX1O00391 747 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 APOC2P02655 101 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 STSP08842 583 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 PTMSP20962 102 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 RBL1P28749 1068 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 MC4RP32245 332 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 GCGRP47871 477 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 ARSFP54793 590 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 HADHBP55084 474 aaKnown RBP25.79■■□□□ 1.72
CHFR-218ENST00000540963 SLC9A5Q14940 896 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 KIR2DS3Q14952 304 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 HIF1AQ16665 826 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 SKOR2Q2VWA4 1001 aaPredicted RBP25.79■■□□□ 1.72
CHFR-218ENST00000540963 BBS12Q6ZW61 710 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 SERPINA9Q86WD7 417 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 OR5AR1Q8NGP9 310 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 VPS50Q96JG6 964 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 APOL2Q9BQE5 337 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 SLC26A1Q9H2B4 701 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 EPS8L2Q9H6S3 715 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 SLC22A11Q9NSA0 550 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 ABHD10Q9NUJ1 306 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 ASF1AQ9Y294 204 aa25.79■■□□□ 1.72
CHFR-218ENST00000540963 MASP2O00187 686 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 ACADLP28330 430 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 TMPRSS15P98073 1019 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 PLOD1Q02809 727 aaPredicted RBP25.78■■□□□ 1.72
CHFR-218ENST00000540963 TLR1Q15399 786 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 SP5Q6BEB4 398 aaPredicted RBP25.78■■□□□ 1.72
CHFR-218ENST00000540963 RPUSD3Q6P087 351 aaKnown RBP25.78■■□□□ 1.72
CHFR-218ENST00000540963 OVCH1Q7RTY7 1134 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 OR5K2Q8NHB8 316 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 LRRC45Q96CN5 670 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 NHEJ1Q9H9Q4 299 aaPredicted RBP25.78■■□□□ 1.72
CHFR-218ENST00000540963 IGSF5Q9NSI5 407 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 IRAK4Q9NWZ3 460 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 SPHK1Q9NYA1 384 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 ALG6Q9Y672 507 aa25.78■■□□□ 1.72
CHFR-218ENST00000540963 H7C0C1 242 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 MFAP3LO75121 409 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 POU3F2P20265 443 aaPredicted RBP25.77■■□□□ 1.72
CHFR-218ENST00000540963 ATP5OP48047 213 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 CDC16Q13042 620 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 ANKRD20A2Q5SQ80 823 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 ANKRD20A1Q5TYW2 823 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 ANKRD20A3Q5VUR7 823 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 DENND5AQ6IQ26 1287 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 TMTC1Q8IUR5 882 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 CLDN19Q8N6F1 224 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 RNF214Q8ND24 703 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 SLX1AQ9BQ83 275 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 LHPPQ9H008 270 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 ENAMQ9NRM1 1142 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 EURLQ9NYK6 297 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 CDC23Q9UJX2 597 aa25.77■■□□□ 1.72
CHFR-218ENST00000540963 NXT1Q9UKK6 140 aaKnown RBP25.77■■□□□ 1.72
CHFR-218ENST00000540963 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.77■■□□□ 1.72
CHFR-218ENST00000540963 A0A1B0GX78 115 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 ARHGAP10A1A4S6 786 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 SOCS6O14544 535 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 ZG16O60844 167 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 AP2A1O95782 977 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 CTSBP07858 339 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 PRF1P14222 555 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 PSMB4P28070 264 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 CDKN1CP49918 316 aaPredicted RBP25.76■■□□□ 1.71
CHFR-218ENST00000540963 TBX2Q13207 712 aaPredicted RBP25.76■■□□□ 1.71
CHFR-218ENST00000540963 OLIG2Q13516 323 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 YOD1Q5VVQ6 348 aaPredicted RBP25.76■■□□□ 1.71
CHFR-218ENST00000540963 CCDC50Q8IVM0 306 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 TSPY26PQ9H489 355 aa25.76■■□□□ 1.71
CHFR-218ENST00000540963 CBFA2T2O43439 604 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 STK10O94804 968 aaKnown RBP25.75■■□□□ 1.71
CHFR-218ENST00000540963 FTH1P02794 183 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 TPBGLP0DKB5 382 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 ALAS2P22557 587 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 NSG1P42857 185 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 RIPPLY3P57055 190 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 FOXL2P58012 376 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 CACNG1Q06432 222 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 FAM180AQ6UWF9 173 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 TAS2R42Q7RTR8 314 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 KLHDC8BQ8IXV7 354 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 DNAJC1Q96KC8 554 aaKnown RBP25.75■■□□□ 1.71
CHFR-218ENST00000540963 LMF1Q96S06 567 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 TBL1YQ9BQ87 522 aa25.75■■□□□ 1.71
CHFR-218ENST00000540963 NLE1Q9NVX2 485 aaPredicted RBP25.75■■□□□ 1.71
CHFR-218ENST00000540963 HS3ST3B1Q9Y662 390 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms