RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 OR4D9Q8NGE8 314 aa17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 OR52E1Q8NGJ3 308 aa17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 OR5AR1Q8NGP9 310 aa17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 OR9A1PQ8NGU1 263 aa17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 STAG3L4Q8TBR4 150 aa17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 DEPDC7Q96QD5 511 aa17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 SLC30A3Q99726 388 aa17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 STMN4Q9H169 189 aaPredicted RBP17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 SENP1Q9P0U3 644 aa17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 TMCO1Q9UM00 188 aa17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 TDRKHQ9Y2W6 561 aaKnown RBP17.02■□□□□ 0.32
CLSTN3-210ENST00000540931 A0A096LPK6 155 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 C2orf74A8MZ97 194 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 TRIM49D1C9J1S8 452 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 MYO1CO00159 1063 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 TSPAN12O95859 305 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 C2P06681 752 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 GSTA1P08263 222 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 RBP1P09455 135 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 KRT15P19012 456 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 MAGEA12P43365 314 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 HNMTP50135 292 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 KIR2DS3Q14952 304 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 ACAP2Q15057 778 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 PERM1Q5SV97 790 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 TMEM71Q6P5X7 295 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 FRA10AC1Q70Z53 315 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 TCAIMQ8N3R3 496 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 RHEBL1Q8TAI7 183 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 RUFY1Q96T51 708 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 HGH1Q9BTY7 390 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 STRADBQ9C0K7 418 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 PCBD2Q9H0N5 130 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 ZZEF1O43149 2961 aa17.01■□□□□ 0.31
CLSTN3-210ENST00000540931 OR5K3A6NET4 321 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 GOLGA6L10A6NI86 522 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 C1QTNF9BB2RNN3 333 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 B4GAT1O43505 415 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 KLHL2O95198 593 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 WISP3O95389 354 aaPredicted RBP17■□□□□ 0.31
CLSTN3-210ENST00000540931 MT-ND3P03897 115 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 ALDOAP04075 364 aaKnown RBP17■□□□□ 0.31
CLSTN3-210ENST00000540931 C1QTNF9P0C862 333 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 MYZAPP0CAP1 466 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 SLC35E2BP0CK96 405 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 CD1CP29017 333 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 OR1D5P58170 312 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 EIF3IQ13347 325 aaKnown RBP17■□□□□ 0.31
CLSTN3-210ENST00000540931 PIWIL4Q7Z3Z4 852 aaKnown RBP17■□□□□ 0.31
CLSTN3-210ENST00000540931 KMT5CQ86Y97 462 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 RASGRP3Q8IV61 690 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 Q8N9G6 341 aaPredicted RBP17■□□□□ 0.31
CLSTN3-210ENST00000540931 OR2L8Q8NGY9 312 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 KIAA1191Q96A73 305 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 CAAP1Q9H8G2 361 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 CAB39LQ9H9S4 337 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 HRASLS2Q9NWW9 162 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 TOR4AQ9NXH8 423 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 UTP6Q9NYH9 597 aaKnown RBP17■□□□□ 0.31
CLSTN3-210ENST00000540931 DCDC2Q9UHG0 476 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 WASF3Q9UPY6 502 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 PLAAQ9Y263 795 aa17■□□□□ 0.31
CLSTN3-210ENST00000540931 SPAARA0A1B0GVQ0 90 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 PIPSLA2A3N6 862 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 D6RAR5 112 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 BTN3A1O00481 513 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 GIPC1O14908 333 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 HGSO14964 777 aaPredicted RBP16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 PHGDHO43175 533 aaKnown RBP16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 CCNDBP1O95273 360 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 S100BP04271 92 aaPredicted RBP16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 F7P08709 466 aaPredicted RBP16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 ANXA5P08758 320 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 CCT5P48643 541 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 CSRP3P50461 194 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 CCL7P80098 99 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 PRKG2Q13237 762 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 BMPR2Q13873 1038 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 NAA30Q147X3 362 aaPredicted RBP16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 AMZ1Q400G9 498 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 BEND6Q5SZJ8 279 aaPredicted RBP16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 UNQ6494/PRO21346Q6UXR6 183 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 KDF1Q8NAX2 398 aaPredicted RBP16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 OR4E2Q8NGC2 313 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 SMPDL3AQ92484 453 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 NCSTNQ92542 709 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 CNOT10Q9H9A5 744 aaKnown RBP16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 INTS7Q9NVH2 962 aaKnown RBP16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 PDP2Q9P2J9 529 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 LGALS13Q9UHV8 139 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 ZMIZ1Q9ULJ6 1067 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 CLCA2Q9UQC9 943 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 OARD1Q9Y530 152 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 NFS1Q9Y697 457 aa16.99■□□□□ 0.31
CLSTN3-210ENST00000540931 MN1Q10571 1320 aaPredicted RBP16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 HMX2A2RU54 273 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 ARHGEF33A8MVX0 844 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 IPO13O94829 963 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 C9P02748 559 aa16.98■□□□□ 0.31
CLSTN3-210ENST00000540931 ERGP11308 486 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms