RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PON2Q15165 354 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 CTF1Q16619 201 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 MEP1AQ16819 746 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 PYCR3Q53H96 274 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 C2orf27AQ580R0 203 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SLC24A5Q71RS6 500 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 MYLPFQ96A32 169 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 TMEM159Q96B96 161 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 AURKBQ96GD4 344 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 NODALQ96S42 347 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 TTPALQ9BTX7 342 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 ZNF717Q9BY31 904 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 RERGLQ9H628 205 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 ALG9Q9H6U8 611 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SP140LQ9H930 580 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 DDX28Q9NUL7 540 aaKnown RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 CLDND1Q9NY35 253 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 UBA2Q9UBT2 640 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 AAR2Q9Y312 384 aaKnown RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 RWDD3Q9Y3V2 267 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 PCDHB9Q9Y5E1 797 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 OAS3Q9Y6K5 1087 aaKnown RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 C5orf42Q9H799 3197 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 TRAV19A0A0A6YYK7 116 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SMIM28A0A1B0GU29 152 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 ILVBLA1L0T0 632 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SYCE1LA8MT33 242 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 F8W810 466 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 FAM72CH0Y354 149 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 AZIN1O14977 448 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 PER2O15055 1255 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 HTR1AP08908 422 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 HGFP14210 728 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 PRKACAP17612 351 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 CTPS1P17812 591 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 MSH3P20585 1137 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 HTR1EP28566 365 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 GRK3P35626 688 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 PRIM2P49643 509 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 CLCNKBP51801 687 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SEMG2Q02383 582 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 CDC20Q12834 499 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 TUSC3Q13454 348 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 UBXN2BQ14CS0 331 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 HIST2H2ACQ16777 129 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 SETMARQ53H47 684 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 UNC50Q53HI1 259 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 FAM72AQ5TYM5 149 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 RSBN1Q5VWQ0 802 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 HIST2H2AA3Q6FI13 130 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 KIAA0930Q6ICG6 404 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 FAM72DQ6L9T8 149 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 BLOC1S3Q6QNY0 202 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 FAM72BQ86X60 149 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 NPWQ8N729 165 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 NDNFQ8TB73 568 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 TSPEARQ8WU66 669 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 PHF10Q8WUB8 498 aaKnown RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 COL26A1Q96A83 441 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 L3HYPDHQ96EM0 354 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 ITCHQ96J02 903 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 UBXN10Q96LJ8 280 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 KLHL5Q96PQ7 755 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 ASB2Q96Q27 587 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 NPY6RQ99463 290 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 RSPH9Q9H1X1 276 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 MID1IP1Q9NPA3 183 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 NECTIN3Q9NQS3 549 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 IL37Q9NZH6 218 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SH3BP4Q9P0V3 963 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 KIF17Q9P2E2 1029 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 TRPC4Q9UBN4 977 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SLC2A6Q9UGQ3 507 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 MAGEL2Q9UJ55 1249 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 LEF1Q9UJU2 399 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 PCDHB3Q9Y5E6 796 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 PTGDR2Q9Y5Y4 395 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 A0A1W2PP18 115 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 NEDD8-MDP1E9PL57 170 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SLC1A7O00341 560 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 AREL1O15033 823 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 ACSL4O60488 711 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SEMA3DO95025 777 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 GLP2RO95838 553 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 DLGAP3O95886 979 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 CHRNA1P02708 482 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 NPR3P17342 541 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 HRH2P25021 359 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 ACLYP53396 1101 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 CDH13P55290 713 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 CHRNB3Q05901 458 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SOX4Q06945 474 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 CD47Q08722 323 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 ZMYND11Q15326 602 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 TOMM20Q15388 145 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 FAM98BQ52LJ0 330 aaKnown RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 NXNL2Q5VZ03 156 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 GLYATQ6IB77 296 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 PRSS55Q6UWB4 352 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms