RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ITGB6P18564 788 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 ITGAXP20702 1163 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 OGNP20774 298 aaKnown RBP10.05□□□□□ -0.8
CDCA3-208ENST00000540683 OAS2P29728 719 aaKnown RBP10.05□□□□□ -0.8
CDCA3-208ENST00000540683 ATP5DP30049 168 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 CA5AP35218 305 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 PPP1CAP62136 330 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 KCNAB1Q14722 419 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 GPR19Q15760 415 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 TCTE1Q5JU00 501 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 LRRC8EQ6NSJ5 796 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 CASC4Q6P4E1 433 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 ZNF517Q6ZMY9 492 aaPredicted RBP10.05□□□□□ -0.8
CDCA3-208ENST00000540683 UNC5AQ6ZN44 842 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 MED25Q71SY5 747 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 ADGRF3Q8IZF5 1079 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 DSELQ8IZU8 1212 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 TMEM102Q8N9M5 508 aaPredicted RBP10.05□□□□□ -0.8
CDCA3-208ENST00000540683 TEX19Q8NA77 164 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 OR5AR1Q8NGP9 310 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 SKA2Q8WVK7 121 aaPredicted RBP10.05□□□□□ -0.8
CDCA3-208ENST00000540683 NDC1Q9BTX1 674 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 KIFC1Q9BW19 673 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 TLR10Q9BXR5 811 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 SEMA4CQ9C0C4 833 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 ACSS2Q9NR19 701 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 FAM114A2Q9NRY5 505 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 INTS10Q9NVR2 710 aaKnown RBP10.05□□□□□ -0.8
CDCA3-208ENST00000540683 PIH1D1Q9NWS0 290 aaKnown RBP10.05□□□□□ -0.8
CDCA3-208ENST00000540683 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.05□□□□□ -0.8
CDCA3-208ENST00000540683 NDOR1Q9UHB4 597 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 PLCL2Q9UPR0 1127 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 COMMD10Q9Y6G5 202 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 SDR42E2A6NKP2 422 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 TARM1B6A8C7 271 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 PGRMC1O00264 195 aaKnown RBP10.04□□□□□ -0.8
CDCA3-208ENST00000540683 BTN3A3O00478 584 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 TERTO14746 1132 aaKnown RBP10.04□□□□□ -0.8
CDCA3-208ENST00000540683 GPC4O75487 556 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 ALPPP05187 535 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 UGT2B7P16662 529 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 AOAHP28039 575 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 CASRP41180 1078 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 MAGEA6P43360 314 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 ILF2Q12905 390 aaKnown RBP10.04□□□□□ -0.8
CDCA3-208ENST00000540683 THOC5Q13769 683 aaKnown RBP10.04□□□□□ -0.8
CDCA3-208ENST00000540683 KYNUQ16719 465 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 FAM214AQ32MH5 1076 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 KIAA0930Q6ICG6 404 aaPredicted RBP10.04□□□□□ -0.8
CDCA3-208ENST00000540683 PCGF5Q86SE9 256 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 ATCAYQ86WG3 371 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 SYTL1Q8IYJ3 562 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 LILRA3Q8N6C8 439 aaPredicted RBP10.04□□□□□ -0.8
CDCA3-208ENST00000540683 OR2L8Q8NGY9 312 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 MAGOHBQ96A72 148 aaKnown RBP10.04□□□□□ -0.8
CDCA3-208ENST00000540683 ZUFSPQ96AP4 578 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 ABHD17AQ96GS6 310 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 FER1L6-AS2Q96M78 137 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 RUNDC3BQ96NL0 473 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 NAT9Q9BTE0 207 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 CHRAC1Q9NRG0 131 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 TREX1Q9NSU2 369 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 KLHL42Q9P2K6 505 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 SOX13Q9UN79 622 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 ICKQ9UPZ9 632 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 PCDHGA9Q9Y5G4 932 aaKnown RBP10.04□□□□□ -0.8
CDCA3-208ENST00000540683 PCDHGA10Q9Y5H3 936 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 FAM169AQ9Y6X4 670 aa10.04□□□□□ -0.8
CDCA3-208ENST00000540683 FAM237BA0A1B0GVD1 139 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 BHMG1C9JSJ3 638 aaPredicted RBP10.03□□□□□ -0.8
CDCA3-208ENST00000540683 SMAPO00193 183 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 PEX12O00623 359 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 RASGRF2O14827 1237 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 ZSCAN9O15535 394 aaPredicted RBP10.03□□□□□ -0.8
CDCA3-208ENST00000540683 OR1I1O60431 355 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 IPO13O94829 963 aaKnown RBP10.03□□□□□ -0.8
CDCA3-208ENST00000540683 VAPBO95292 243 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 KRT14P02533 472 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 ST6GAL1P15907 406 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 CD9P21926 228 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 CCR7P32248 378 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 ARCN1P48444 511 aaKnown RBP10.03□□□□□ -0.8
CDCA3-208ENST00000540683 FNTAP49354 379 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 PGDP52209 483 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 DCDP81605 110 aaKnown RBP10.03□□□□□ -0.8
CDCA3-208ENST00000540683 GPS1Q13098 491 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 GRM7Q14831 915 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 ARHGAP19Q14CB8 494 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 BRD3Q15059 726 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 NCF4Q15080 339 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 RHBDD2Q6NTF9 364 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 UGT3A1Q6NUS8 523 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 TTC29Q8NA56 475 aaPredicted RBP10.03□□□□□ -0.8
CDCA3-208ENST00000540683 MCUQ8NE86 351 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 OR2A14Q96R47 310 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 SPATA7Q9P0W8 599 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 ANKMY1Q9P2S6 941 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 SLC2A6Q9UGQ3 507 aa10.03□□□□□ -0.8
CDCA3-208ENST00000540683 NXT1Q9UKK6 140 aaKnown RBP10.03□□□□□ -0.8
CDCA3-208ENST00000540683 TCFL5Q9UL49 500 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms