RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 KIF1CO43896 1103 aaKnown RBP12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 KDM1AO60341 852 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 PKLRP30613 574 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 KPNA2P52292 529 aaKnown RBP12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 RAB10P61026 200 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 PRKAA1Q13131 559 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 CAMK2BQ13554 666 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 COL9A2Q14055 689 aaPredicted RBP12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 C16orf72Q14CZ0 275 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 ZKSCAN8Q15776 578 aaPredicted RBP12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 ARMC6Q6NXE6 501 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 NKAPQ8N5F7 415 aaKnown RBP12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 OR9A1PQ8NGU1 263 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 DENND1AQ8TEH3 1009 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 PDLIM5Q96HC4 596 aaKnown RBP12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 PKP4Q99569 1192 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 STRADBQ9C0K7 418 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 SPHK1Q9NYA1 384 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 RAB21Q9UL25 225 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 MSRB2Q9Y3D2 182 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 IKBKGQ9Y6K9 419 aa12.32□□□□□ -0.44
TSPAN9-207ENST00000539631 ANKRD12Q6UB98 2062 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 ZFHX4Q86UP3 3567 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 A0A1W2PNU3 283 aaPredicted RBP12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 TMX2-CTNND1H3BSU7 103 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 MYO1CO00159 1063 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 SLC16A5O15375 505 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 SYF2O95926 243 aaKnown RBP12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 SHBGP04278 402 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 C8GP07360 202 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 CHRM5P08912 532 aaPredicted RBP12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 MAP4P27816 1152 aaKnown RBP12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 PEBP1P30086 187 aaKnown RBP12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 HSD17B3P37058 310 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 SERPINB9P50453 376 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 RAB28P51157 221 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 SHC2P98077 582 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 TRA2AQ13595 282 aaKnown RBP eCLIP12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 C3orf38Q5JPI3 329 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 CACHD1Q5VU97 1274 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 EMBQ6PCB8 327 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 FBXO38Q6PIJ6 1188 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 RAPH1Q70E73 1250 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 ARHGAP22Q7Z5H3 698 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 TAX1BP1Q86VP1 789 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 SPATA6LQ8N4H0 392 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 LINC01555Q8NAE3 123 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 FBXO15Q8NCQ5 510 aaPredicted RBP12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 OR2L8Q8NGY9 312 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 CAVIN3Q969G5 261 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 GRAMD1AQ96CP6 724 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 ZDHHC12Q96GR4 267 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 LIN37Q96GY3 246 aaPredicted RBP12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 PPM1MQ96MI6 270 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 MAP3K3Q99759 626 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 DHRS4Q9BTZ2 278 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 SLC12A9Q9BXP2 914 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 UNKQ9C0B0 810 aaKnown RBP12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 TWSG1Q9GZX9 223 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 ACTR10Q9NZ32 417 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 OR6C2Q9NZP2 312 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 SPATA7Q9P0W8 599 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 ZNF180Q9UJW8 692 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 ANGPTL2Q9UKU9 493 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 POMT2Q9UKY4 750 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 SATB2Q9UPW6 733 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 PDE10AQ9Y233 779 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 CNOT1A5YKK6 2376 aaKnown RBP12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 PCM1Q15154 2024 aa12.31□□□□□ -0.44
TSPAN9-207ENST00000539631 PKD1L2Q7Z442 2459 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 CCDC187A0A096LP49 1063 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 PIPSLA2A3N6 862 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 NPEPPSL1A6NEC2 478 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 C2orf74A8MZ97 194 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 ISM1B1AKI9 464 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 CDC7O00311 574 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 RASSF9O75901 435 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 SLC35E2BP0CK96 405 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 CCDC166P0CW27 439 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 HGFP14210 728 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 UGT2B7P16662 529 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 CYP2A7P20853 494 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 CRABP2P29373 138 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 PRDX3P30048 256 aaKnown RBP12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 SEPHS1P49903 392 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 CSRP3P50461 194 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 SP140Q13342 867 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 FASTKQ14296 549 aaKnown RBP12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 PHKG1Q16816 387 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 FOXR1Q6PIV2 292 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 TAOK1Q7L7X3 1001 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 RAB11FIP2Q7L804 512 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 PRSS42Q7Z5A4 293 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 FBXO39Q8N4B4 442 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 RAB42Q8N4Z0 105 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 FLVCR1-AS1Q8TAF5 88 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 OR2A14Q96R47 310 aa12.3□□□□□ -0.44
TSPAN9-207ENST00000539631 CD180Q99467 661 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms