RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 KCNAB2Q13303 367 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 XAF1Q6GPH4 301 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 CRTC1Q6UUV9 634 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 ZDHHC13Q8IUH4 622 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 CNIH3Q8TBE1 160 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 CDK5RAP1Q96SZ6 601 aaKnown RBP13.74□□□□□ -0.21
UBE3B-210ENST00000539599 PAIP1Q9H074 479 aaKnown RBP13.74□□□□□ -0.21
UBE3B-210ENST00000539599 CFAP97Q9P2B7 532 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 PDE10AQ9Y233 779 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 ELOVL7A1L3X0 281 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 ARNTLO00327 626 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 EPB42P16452 691 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 DGKAP23743 735 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 RPIAP49247 311 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 DDX39BQ13838 428 aaKnown RBP13.73□□□□□ -0.21
UBE3B-210ENST00000539599 USP39Q53GS9 565 aaKnown RBP13.73□□□□□ -0.21
UBE3B-210ENST00000539599 INO80DQ53TQ3 878 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-210ENST00000539599 CCNYL2Q5T2Q4 361 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 CES5AQ6NT32 575 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 SELENOMQ8WWX9 145 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 ERLEC1Q96DZ1 483 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 THAP11Q96EK4 314 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 APOLD1Q96LR9 279 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 PPP3R2Q96LZ3 170 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 DPH2Q9BQC3 489 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-210ENST00000539599 OSBPL6Q9BZF3 934 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 HIPK3Q9H422 1215 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 MTG2Q9H4K7 406 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 PRM3Q9NNZ6 103 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 PAK1IP1Q9NWT1 392 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-210ENST00000539599 IRAK4Q9NWZ3 460 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 ERVK-11Q9UQG0 969 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 PCDHB1Q9Y5F3 818 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 TYW5A2RUC4 315 aaKnown RBP13.73□□□□□ -0.21
UBE3B-210ENST00000539599 E2F6O75461 281 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 STK16O75716 305 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 AKT1P31749 480 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 MRPL19P49406 292 aaKnown RBP13.73□□□□□ -0.21
UBE3B-210ENST00000539599 VAC14Q08AM6 782 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 BFSP2Q13515 415 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 OR4F3Q6IEY1 312 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 NEK5Q6P3R8 708 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 NECAB2Q7Z6G3 386 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 NXPE1Q8N323 547 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 C2orf15Q8WU43 125 aaKnown RBP13.73□□□□□ -0.21
UBE3B-210ENST00000539599 SCAMP4Q969E2 229 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 PDLIM5Q96HC4 596 aaKnown RBP13.73□□□□□ -0.21
UBE3B-210ENST00000539599 ZBTB18Q99592 522 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 ZDHHC6Q9H6R6 413 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 CD320Q9NPF0 282 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 FAM118AQ9NWS6 357 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 SLCO3A1Q9UIG8 710 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 TMPRSS11EQ9UL52 423 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 SLC22A14Q9Y267 594 aa13.73□□□□□ -0.21
UBE3B-210ENST00000539599 IFRD1O00458 451 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-210ENST00000539599 ABLIM3O94929 683 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 ZNF682O95780 498 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 GABRR2P28476 465 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 ALDH4A1P30038 563 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 HLCSP50747 726 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 CD47Q08722 323 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 DPY19L1Q2PZI1 675 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 GAREM2Q75VX8 874 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 PIWIL3Q7Z3Z3 882 aaKnown RBP13.72□□□□□ -0.21
UBE3B-210ENST00000539599 LILRA3Q8N6C8 439 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-210ENST00000539599 GOLM1Q8NBJ4 401 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 HJURPQ8NCD3 748 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-210ENST00000539599 CHST14Q8NCH0 376 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 CCDC90BQ9GZT6 254 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 CLMPQ9H6B4 373 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 SERHLQ9NQF3 203 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 PRDM8Q9NQV8 689 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 ABCB8Q9NUT2 735 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 DNMT3BQ9UBC3 853 aaKnown RBP13.72□□□□□ -0.21
UBE3B-210ENST00000539599 CORINQ9Y5Q5 1042 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 EYSQ5T1H1 3165 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 TMEM202A6NGA9 273 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 hCG_2039718K7EN88 272 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 GMNNO75496 209 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 WDR47O94967 919 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 UGT2B4P06133 528 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 EPHA2P29317 976 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 GSSP48637 474 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 SMARCB1Q12824 385 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-210ENST00000539599 ACBD5Q5T8D3 534 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-210ENST00000539599 SNX29P2Q8IUI4 249 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 DCAF4L2Q8NA75 395 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 TBC1D15Q8TC07 691 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 SDCCAG3Q96C92 435 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 ASIC4Q96FT7 647 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 MUC13Q9H3R2 512 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 KAT8Q9H7Z6 458 aaKnown RBP13.72□□□□□ -0.21
UBE3B-210ENST00000539599 IL21Q9HBE4 155 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 PARVBQ9HBI1 364 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 PFDN4Q9NQP4 134 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 ABCG2Q9UNQ0 655 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 CCL26Q9Y258 94 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 SCN8AQ9UQD0 1980 aa13.72□□□□□ -0.21
UBE3B-210ENST00000539599 CREG1O75629 220 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms