RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 LRRTM4Q86VH4 590 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CAMKVQ8NCB2 501 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SUN3Q8TAQ9 357 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ZCCHC10Q8TBK6 192 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PIGKQ92643 395 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 HIST1H2AAQ96QV6 131 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 RETREG1Q9H6L5 497 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CD320Q9NPF0 282 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 GRHL1Q9NZI5 618 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 MKL2Q9ULH7 1088 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF30P17039 623 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CRISP3P54108 245 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SCN1BQ07699 218 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 LRRC32Q14392 662 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SOWAHAQ2M3V2 549 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SWT1Q5T5J6 900 aaKnown RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 TCEAL6Q6IPX3 200 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 LRTOMTQ8WZ04 291 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF516Q92618 1163 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 FATE1Q969F0 183 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 GTPBP3Q969Y2 492 aaKnown RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CMTM7Q96FZ5 175 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CST11Q9H112 138 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ANKHQ9HCJ1 492 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 GDAP2Q9NXN4 497 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SALL4Q9UJQ4 1053 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CFL2Q9Y281 166 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 MED31Q9Y3C7 131 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 TRBV23OR9-2A0A075B6M9 112 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 EDDM13A0A1B0GTR0 161 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 KDM4FA0A1W2PPD8 638 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 A0A1W2PRB8 838 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 A0A1W2PRG6 482 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 GMFGO60234 142 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PFKMP08237 780 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 COL6A1P12109 1028 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CDH1P12830 882 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 TIE1P35590 1138 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 RPL26P61254 145 aaKnown RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 E2F2Q14209 437 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PAFAH1B3Q15102 231 aaKnown RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PLEKHG6Q3KR16 790 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ZFP69Q49AA0 526 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CELF5Q8N6W0 485 aaKnown RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ATP6V1C2Q8NEY4 427 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SH3RF2Q8TEC5 729 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 LRRC58Q96CX6 371 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 RPL10LQ96L21 214 aaKnown RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 MKKSQ9NPJ1 570 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 C14orf105Q9NVL8 296 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 WRBO00258 174 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 AIREO43918 545 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 RGS20O76081 388 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 RPLP0P05388 317 aaKnown RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 CD2P06729 351 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 TAS2R50P59544 299 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PRKCZQ05513 592 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SIM2Q14190 667 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 MAPK14Q16539 360 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 NCBP2-AS2Q69YL0 99 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 DNM1P34Q6PK57 102 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PRSS55Q6UWB4 352 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PAMR1Q6UXH9 720 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SLC29A4Q7RTT9 530 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ANKRD46Q86W74 232 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 NXPE1Q8N323 547 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PARP8Q8N3A8 854 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 DBF4BQ8NFT6 615 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 NAT14Q8WUY8 206 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 ACOT12Q8WYK0 555 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 SHDQ96IW2 340 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 EFCAB11Q9BUY7 163 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 LGR4Q9BXB1 951 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PAK6Q9NQU5 681 aaPredicted RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 NDRG2Q9UN36 371 aaKnown RBP6.36□□□□□ -1.39
LSAMP-207ENST00000539563 TESMINQ9Y4I5 508 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 PEX16Q9Y5Y5 336 aa6.36□□□□□ -1.39
LSAMP-207ENST00000539563 RBMXL2O75526 392 aaKnown RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 HLA-DQB2P05538 268 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 KCNE1P15382 129 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 FECHP22830 423 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 MLLT3P42568 568 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 RORCP51449 518 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 NCBP2P52298 156 aaKnown RBP eCLIP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 FPGSQ05932 587 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 FOXM1Q08050 763 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 GPM6BQ13491 265 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF460Q14592 562 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 PRAMEF14Q5SWL7 426 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 PRAMEF13Q5VWM6 474 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 CHST4Q8NCG5 386 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 GEMIN6Q8WXD5 167 aaKnown RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 TOP1MTQ969P6 601 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 YTHDF1Q9BYJ9 559 aaKnown RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 SMOC2Q9H3U7 446 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 TCF7L1Q9HCS4 588 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 RGPD1P0DJD0 1748 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 KLRG2A4D1S0 409 aaPredicted RBP6.35□□□□□ -1.39
LSAMP-207ENST00000539563 AQP12BA6NM10 295 aa6.35□□□□□ -1.39
LSAMP-207ENST00000539563 ENPP3O14638 875 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms