RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	STX7	O15400	261 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	GPR42	O15529	346 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	RAD51C	O43502	376 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	LAT	O43561	262 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PPFIA2	O75334	1257 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	RECQL5	O94762	991 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	SEC24D	O94855	1032 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	SUN1	O94901	812 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	CLDN7	O95471	211 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	FAM107A	O95990	144 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	LMNA	P02545	664 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	CFI	P05156	583 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PCCB	P05166	539 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	JUN	P05412	331 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PYGL	P06737	847 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	ATXN1L	P0C7T5	689 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MYZAP	P0CAP1	466 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MLN	P12872	115 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	LPO	P22079	712 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	HNRNPA2B1	P22626	353 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	LHCGR	P22888	699 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	ADRA1A	P35348	466 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	HOXD12	P35452	270 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	HMGCL	P35914	325 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MDH1	P40925	334 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	HADHA	P40939	763 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PTGER3	P43115	390 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MAGEA6	P43360	314 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	STC1	P52823	247 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	THOP1	P52888	689 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	C21orf59	P57076	290 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MRPS25	P82663	173 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	SRSF2	Q01130	221 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	CAV1	Q03135	178 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	ACTN3	Q08043	901 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	RALGDS	Q12967	914 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MTM1	Q13496	603 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	OLIG2	Q13516	323 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	IHH	Q14623	411 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	KCNJ11	Q14654	390 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	POU6F1	Q14863	301 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MORF4L2	Q15014	288 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	TAF1A	Q15573	450 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	CNGA3	Q16281	694 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	KCTD19	Q17RG1	926 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	INAVA	Q3KP66	663 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PLK5	Q496M5	336 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	TMEM52B	Q4KMG9	183 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	AGBL2	Q5U5Z8	902 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZDHHC20	Q5W0Z9	365 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	LAIR1	Q6GTX8	287 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	TCTN3	Q6NUS6	607 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	CRTC1	Q6UUV9	634 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	CCDC121	Q6ZUS5	278 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266		Q6ZVL8	140 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	NLRP9	Q7RTR0	991 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	HSD11B1L	Q7Z5J1	315 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	TSPAN33	Q86UF1	283 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	SYT12	Q8IV01	421 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	KLHDC8B	Q8IXV7	354 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	NRSN1	Q8IZ57	195 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PDIK1L	Q8N165	341 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZCCHC9	Q8N567	271 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MCU	Q8NE86	351 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PIK3C3	Q8NEB9	887 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	DENND6B	Q8NEG7	585 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PPHLN1	Q8NEY8	458 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PRSS33	Q8NF86	280 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	OR52K1	Q8NGK4	314 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	BRSK1	Q8TDC3	778 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	IFT81	Q8WYA0	676 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	CPT1B	Q92523	772 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PIGK	Q92643	395 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	KLK6	Q92876	244 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	VOPP1	Q96AW1	172 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	AP2M1	Q96CW1	435 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	NUS1	Q96E22	293 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	DTD2	Q96FN9	168 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	LOXL4	Q96JB6	756 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZC3H10	Q96K80	434 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	NSMCE3	Q96MG7	304 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	LYSMD1	Q96S90	227 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MYOC	Q99972	504 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	ERP44	Q9BS26	406 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	SLC17A9	Q9BYT1	436 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	FAM129A	Q9BZQ8	928 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	IL22	Q9GZX6	179 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MEGF9	Q9H1U4	602 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	DPH5	Q9H2P9	285 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	ARNT2	Q9HBZ2	717 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PIH1D1	Q9NWS0	290 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	MKS1	Q9NXB0	559 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	ING3	Q9NXR8	418 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	NCDN	Q9UBB6	729 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	ANAPC5	Q9UJX4	755 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	NFU1	Q9UMS0	254 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PPIL1	Q9Y3C6	166 aa		4.26	□□□□□ -1.73
SNHG1-208	ENST00000538266	PCDHGA5	Q9Y5G8	931 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms