RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TAS1R1Q7RTX1 841 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 RANBP3LQ86VV4 465 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 HEATR4Q86WZ0 1026 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ULK2Q8IYT8 1036 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 IL22RA1Q8N6P7 574 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 GRHL3Q8TE85 626 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 SHISA4Q96DD7 197 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 TBL1XR1Q9BZK7 514 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 C1orf109Q9NX04 203 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 SORCS3Q9UPU3 1222 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 RGPD1P0DJD0 1748 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ITGB4P16144 1822 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 DNAJC25-GNG10A0A024R161 153 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 A6NCN8 305 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CAPN14A8MX76 684 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 MAGEB17A8MXT2 336 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 MID1O15344 667 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PCDHGA12O60330 932 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PGLSO95336 258 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 C8orf89P0DMQ9 161 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CLUP10909 449 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CD72P21854 359 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ATP5A1P25705 553 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 MREGQ8N565 214 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CLDN19Q8N6F1 224 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PIH1D2Q8WWB5 315 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 FAM83CQ9BQN1 747 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 TDRD1Q9BXT4 1180 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 HRASLS2Q9NWW9 162 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ZNF180Q9UJW8 692 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CDH7Q9ULB5 785 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 OR6C74A6NCV1 312 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 FAM72CH0Y354 149 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 MAGEB3O15480 346 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PGM3O95394 542 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 FABP3P05413 133 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 HNRNPCP07910 306 aaKnown RBP eCLIP5.25□□□□□ -1.576e-6■□□□□ 10.2
LRP6-203ENST00000538239 MYCLP1P12525 358 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 GLDCP23378 1020 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 NTSR1P30989 418 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 VSX2P58304 361 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 PCDH1Q08174 1060 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ADRM1Q16186 407 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ZSWIM7Q19AV6 140 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.25□□□□□ -1.57
LRP6-203ENST00000538239 FAM72AQ5TYM5 149 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 GLYATQ6IB77 296 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 FAM72DQ6L9T8 149 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 DPY19L3Q6ZPD9 716 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 FAM72BQ86X60 149 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 NUDT13Q86X67 352 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 TMEM25Q86YD3 366 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 AVL9Q8NBF6 648 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PLA2G15Q8NCC3 412 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 OR5AK3PQ8NH89 298 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 HLA-CQ95604 372 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ZBED6CLQ96FA7 236 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 NPY6RQ99463 290 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 KCNH6Q9H252 994 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 STMN3Q9NZ72 180 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PDP1Q9P0J1 537 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 RAPGEFL1Q9UHV5 662 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 MAGEL2Q9UJ55 1249 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PAIP2BQ9ULR5 123 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 GSTK1Q9Y2Q3 226 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 BACE2Q9Y5Z0 518 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 STYXL1Q9Y6J8 313 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 WASF2Q9Y6W5 498 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CACNA1SQ13698 1873 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 FAM86C2PA6NEL3 165 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 RFXAPO00287 272 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ZNF623O75123 536 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 TSC22D2O75157 780 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 TGDSO95455 350 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ALPPP05187 535 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 RAB8AP61006 207 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ID2Q02363 134 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PAFAH1B3Q15102 231 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 GPR68Q15743 365 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CST6Q15828 149 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 RFX4Q33E94 735 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 Q6ZVL8 140 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 DEPDC4Q8N2C3 294 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PIK3C3Q8NEB9 887 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 LENG8Q96PV6 779 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 OR2M4Q96R27 311 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 GPER1Q99527 375 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CDCA3Q99618 268 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 TFB2MQ9H5Q4 396 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 CTPS2Q9NRF8 586 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 RUVBL1Q9Y265 456 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 PNMA8CA0A1B0GUJ8 204 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CDC123O75794 336 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 TMEM63AO94886 807 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 OR5F1O95221 314 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ALOX5P09917 674 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 SLC7A1P30825 629 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 TRAF3Q13114 568 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 NDUFAF6Q330K2 333 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 CYP27C1Q4G0S4 372 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms