RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 MICU2Q8IYU8 434 aa13.77□□□□□ -0.2
CLPB-209ENST00000538039 ADGRG2Q8IZP9 1017 aa13.77□□□□□ -0.2
CLPB-209ENST00000538039 YIPF6Q96EC8 236 aa13.77□□□□□ -0.2
CLPB-209ENST00000538039 RBM4BQ9BQ04 359 aaKnown RBP13.77□□□□□ -0.2
CLPB-209ENST00000538039 RBM4Q9BWF3 364 aaKnown RBP13.77□□□□□ -0.2
CLPB-209ENST00000538039 SEPT3Q9UH03 358 aa13.77□□□□□ -0.2
CLPB-209ENST00000538039 ZNF490Q9ULM2 529 aaPredicted RBP13.77□□□□□ -0.2
CLPB-209ENST00000538039 PCDHB5Q9Y5E4 795 aa13.77□□□□□ -0.2
CLPB-209ENST00000538039 F5H5T6 163 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 hCG_2039718K7EN88 272 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 BCKDKO14874 412 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 PER2O15055 1255 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 STX7O15400 261 aaKnown RBP13.77□□□□□ -0.21
CLPB-209ENST00000538039 E2F6O75461 281 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 MT-ND2P03891 347 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 LCKP06239 509 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 TTPAP49638 278 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 USP39Q53GS9 565 aaKnown RBP13.77□□□□□ -0.21
CLPB-209ENST00000538039 FAM171A1Q5VUB5 890 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 PRR23BQ6ZRT6 265 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 FRA10AC1Q70Z53 315 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 ARL10Q8N8L6 244 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 ZNF300Q96RE9 604 aaPredicted RBP13.77□□□□□ -0.21
CLPB-209ENST00000538039 ACPTQ9BZG2 426 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 MIR1-1HGQ9H1L0 117 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 PALMDQ9NP74 551 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 VPS51Q9UID3 782 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 PCDHB9Q9Y5E1 797 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 H0Y626 953 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 KDELR3O43731 214 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 GABARAPO95166 117 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 TRIM16O95361 564 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 NADKO95544 446 aaPredicted RBP13.77□□□□□ -0.21
CLPB-209ENST00000538039 ANGPTL1O95841 491 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 MZF1P28698 734 aaPredicted RBP13.77□□□□□ -0.21
CLPB-209ENST00000538039 NRIP1P48552 1158 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 BHMTQ93088 406 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 ARHGAP39Q9C0H5 1083 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 RIBC2Q9H4K1 309 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 RASSF1Q9NS23 344 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 NUDT4Q9NZJ9 180 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 IL17CQ9P0M4 197 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 FCF1Q9Y324 198 aaKnown RBP13.77□□□□□ -0.21
CLPB-209ENST00000538039 C5orf42Q9H799 3197 aa13.77□□□□□ -0.21
CLPB-209ENST00000538039 MTMR11A4FU01 709 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 PRAMEF4O60810 478 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 FADS2O95864 444 aaKnown RBP13.76□□□□□ -0.21
CLPB-209ENST00000538039 SLC35A2P78381 396 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 ZXDBP98169 803 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 INAQ16352 499 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 SOWAHCQ53LP3 525 aaPredicted RBP13.76□□□□□ -0.21
CLPB-209ENST00000538039 PRAMEF9Q5VWM5 478 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 EFL1Q7Z2Z2 1120 aaKnown RBP13.76□□□□□ -0.21
CLPB-209ENST00000538039 DYNC2LI1Q8TCX1 351 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 GLMNQ92990 594 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 NRBF2Q96F24 287 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 DPH2Q9BQC3 489 aaPredicted RBP13.76□□□□□ -0.21
CLPB-209ENST00000538039 CPPED1Q9BRF8 314 aaPredicted RBP13.76□□□□□ -0.21
CLPB-209ENST00000538039 DPY30Q9C005 99 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 RNF167Q9H6Y7 350 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 TLR8Q9NR97 1041 aaKnown RBP13.76□□□□□ -0.21
CLPB-209ENST00000538039 ARIH1Q9Y4X5 557 aaPredicted RBP13.76□□□□□ -0.21
CLPB-209ENST00000538039 TTC34A8MYJ7 566 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 YY2O15391 372 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 SLC16A6O15403 523 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 ACSL4O60488 711 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 NBNO60934 754 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 GLUD1P00367 558 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 ASGR1P07306 291 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 RCVRNP35243 200 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 GABARAPL2P60520 117 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 VLDLRP98155 873 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 CAP1Q01518 475 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 SLC13A2Q13183 592 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 CPSF6Q16630 551 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLPB-209ENST00000538039 CXorf57Q6NSI4 855 aaKnown RBP13.76□□□□□ -0.21
CLPB-209ENST00000538039 OR5K1Q8NHB7 308 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 ABHD8Q96I13 439 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 ZNF641Q96N77 438 aaPredicted RBP13.76□□□□□ -0.21
CLPB-209ENST00000538039 TSSK3Q96PN8 268 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 TRIT1Q9H3H1 467 aaKnown RBP13.76□□□□□ -0.21
CLPB-209ENST00000538039 Q9Y3F1 56 aa13.76□□□□□ -0.21
CLPB-209ENST00000538039 A0A1W2PQ67 120 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 GRXCR2A6NFK2 248 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 ZBBXA8MT70 800 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 DUSP11O75319 330 aaKnown RBP13.75□□□□□ -0.21
CLPB-209ENST00000538039 GSSP48637 474 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 CLCN4P51793 760 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 RTP2Q5QGT7 225 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 SERPINA9Q86WD7 417 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 RASAL3Q86YV0 1011 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 ZCCHC7Q8N3Z6 543 aaKnown RBP13.75□□□□□ -0.21
CLPB-209ENST00000538039 WFDC5Q8TCV5 224 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 HPS1Q92902 700 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 FUBP3Q96I24 572 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLPB-209ENST00000538039 MAGEH1Q9H213 219 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 SCHIP1Q9P0W5 487 aaPredicted RBP13.75□□□□□ -0.21
CLPB-209ENST00000538039 SLC25A14O95258 325 aaPredicted RBP13.75□□□□□ -0.21
CLPB-209ENST00000538039 PDYNP01213 254 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 ZDHHC11BP0C7U3 371 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms