RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 RAD51AP1Q96B01 352 aa11.4□□□□□ -0.58
SPARC-207ENST00000537849 CAMK1GQ96NX5 476 aa11.4□□□□□ -0.58
SPARC-207ENST00000537849 OSGEPL1Q9H4B0 414 aa11.4□□□□□ -0.58
SPARC-207ENST00000537849 NPHS2Q9NP85 383 aa11.4□□□□□ -0.58
SPARC-207ENST00000537849 SEMA4BQ9NPR2 832 aaPredicted RBP11.4□□□□□ -0.58
SPARC-207ENST00000537849 INTS7Q9NVH2 962 aaKnown RBP11.4□□□□□ -0.58
SPARC-207ENST00000537849 WWOXQ9NZC7 414 aa11.4□□□□□ -0.58
SPARC-207ENST00000537849 CIDEBQ9UHD4 219 aa11.4□□□□□ -0.58
SPARC-207ENST00000537849 ASF1AQ9Y294 204 aa11.4□□□□□ -0.58
SPARC-207ENST00000537849 TRAF6Q9Y4K3 522 aa11.4□□□□□ -0.58
SPARC-207ENST00000537849 CFAP20Q9Y6A4 193 aaKnown RBP11.4□□□□□ -0.58
SPARC-207ENST00000537849 BCAT2O15382 392 aaPredicted RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 CCNT2O60583 730 aaKnown RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 MLYCDO95822 493 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 SLC16A8O95907 504 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 CSF2P04141 144 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 TROVE2P10155 538 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPARC-207ENST00000537849 ERGP11308 486 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 PRDX3P30048 256 aaKnown RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 ACTR1BP42025 376 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 NXPH1P58417 271 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 ERVPABLB-1P60509 514 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 ACTR1AP61163 376 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 LCP2Q13094 533 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 PRKG2Q13237 762 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 NAE1Q13564 534 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 GKAP1Q5VSY0 366 aaPredicted RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 DUS1LQ6P1R4 473 aaKnown RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 ARMCX6Q7L4S7 300 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 SYVN1Q86TM6 617 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 CUZD1Q86UP6 607 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 C11orf74Q86VG3 221 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 PARGQ86W56 976 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 PHACTR4Q8IZ21 702 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 CLYBLQ8N0X4 340 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 LMNTD1Q8N9Z9 388 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 MAPK15Q8TD08 544 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 MAGEC3Q8TD91 643 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 AGAP11Q8TF27 550 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 ATL1Q8WXF7 558 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 ZC3H10Q96K80 434 aaKnown RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 C12orf66Q96MD2 445 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 FERD3LQ96RJ6 166 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 ZNF382Q96SR6 550 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 NRTNQ99748 197 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 MENTQ9BUN1 341 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 NTMT1Q9BV86 223 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 ATG10Q9H0Y0 220 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 TRIT1Q9H3H1 467 aaKnown RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 MVB12BQ9H7P6 319 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 NOL11Q9H8H0 719 aaKnown RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 IPPKQ9H8X2 491 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 ZNF624Q9P2J8 865 aaPredicted RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 OPTCQ9UBM4 332 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 MARCOQ9UEW3 520 aaPredicted RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 DCTN4Q9UJW0 460 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 USH1CQ9Y6N9 552 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 GOLGA4Q13439 2230 aaKnown RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 ARID1BQ8NFD5 2236 aaPredicted RBP11.39□□□□□ -0.59
SPARC-207ENST00000537849 HEATR5BQ9P2D3 2071 aa11.39□□□□□ -0.59
SPARC-207ENST00000537849 PRAMEF33A0A0G2JMD5 474 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 OR52A4PA6NMU1 304 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 PDZK1P1A8MUH7 402 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 TMEM233B4DJY2 109 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 E7ENX8 843 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 PRAMEF4O60810 478 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 ESRRBO95718 433 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 RPN2P04844 631 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 CELA2BP08218 269 aaPredicted RBP11.38□□□□□ -0.59
SPARC-207ENST00000537849 MTHFD1P11586 935 aaKnown RBP11.38□□□□□ -0.59
SPARC-207ENST00000537849 JUNDP17535 347 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 SERPINB3P29508 390 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 SLC19A1P41440 591 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 BLKP51451 505 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 HK2P52789 917 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 ARFIP2P53365 341 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 PNLIPRP1P54315 467 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 AQP5P55064 265 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 PKNOX1P55347 436 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 BNC1Q01954 994 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 TAP2Q03519 686 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 PCDH1Q08174 1060 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 C1orf61Q13536 156 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 FASTKQ14296 549 aaKnown RBP11.38□□□□□ -0.59
SPARC-207ENST00000537849 TCEA2Q15560 299 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 CYP2A13Q16696 494 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 ZNF528Q3MIS6 628 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 SH2D4BQ5SQS7 431 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 PRAMEF9Q5VWM5 478 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 FAM219BQ5XKK7 198 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 IYDQ6PHW0 289 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 SLC30A9Q6PML9 568 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 EPGNQ6UW88 154 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 THOC6Q86W42 341 aaKnown RBP11.38□□□□□ -0.59
SPARC-207ENST00000537849 DCUN1D3Q8IWE4 304 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 ANKS4BQ8N8V4 417 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 CCDC197Q8NCU1 140 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 OR52B6Q8NGF0 335 aa11.38□□□□□ -0.59
SPARC-207ENST00000537849 SETD7Q8WTS6 366 aaKnown RBP11.38□□□□□ -0.59
SPARC-207ENST00000537849 SKA1Q96BD8 255 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms