RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 NIPSNAP2O75323 286 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 MATN4O95460 622 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 CCNYL3P0C7X3 344 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 PKMP14618 531 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 F8A1P23610 371 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 PEBP1P30086 187 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 CYP4F2P78329 520 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 ZNF470Q6ECI4 717 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 CALML6Q8TD86 181 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 TCTN2Q96GX1 697 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 CATSPER2Q96P56 530 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 NAT9Q9BTE0 207 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 FANCEQ9HB96 536 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 MAD1L1Q9Y6D9 718 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 ZNF462Q96JM2 2506 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 A0A0J9YY10 115 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 C21orf140B9A014 251 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 H3BMH7 237 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 RASGRF2O14827 1237 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 MAP3K7O43318 606 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 CPNE3O75131 537 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 SCRG1O75711 98 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 C1orf105O95561 183 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 TTC4O95801 387 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 PVRP15151 417 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 PGAM1P18669 254 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 CD9P21926 228 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 CCNFP41002 786 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 GABRA4P48169 554 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 DR1Q01658 176 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 MC1RQ01726 317 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 THOC5Q13769 683 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 CRYMQ14894 314 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 MORF4L2Q15014 288 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 TBR1Q16650 682 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 IZUMO3Q5VZ72 239 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 CDHR3Q6ZTQ4 885 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 DENND6AQ8IWF6 608 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 C19orf47Q8N9M1 422 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 OR2L8Q8NGY9 312 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 GSDMBQ8TAX9 411 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 HMGCLL1Q8TB92 370 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 STARD8Q92502 1023 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 KCNJ9Q92806 393 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 EXTL1Q92935 676 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 RAD51AP1Q96B01 352 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 SLC22A18Q96BI1 424 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 MED8Q96G25 268 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 EBNA1BP2Q99848 306 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 RAB11FIP5Q9BXF6 653 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 KCND3Q9UK17 655 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 CROTQ9UKG9 612 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 PLAGL1Q9UM63 463 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 MED16Q9Y2X0 877 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 NFS1Q9Y697 457 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 COMMD10Q9Y6G5 202 aa16.61■□□□□ 0.25
SFSWAP-205ENST00000537164 TP73O15350 636 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 PRICKLE3O43900 615 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 FKBP9O95302 570 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 PRB1P04280 392 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 NTRK1P04629 796 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 CHRM3P20309 590 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 DLSTP36957 453 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 SLC1A2P43004 574 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 PAFAH1B1P43034 410 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 CLCN7P51798 805 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 DHX9Q08211 1270 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 CBLBQ13191 982 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 CTBP1Q13363 440 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 LY6DQ14210 128 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 ZIC1Q15915 447 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 MSS51Q4VC12 460 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 ZNF549Q6P9A3 640 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 TTC23LQ6PF05 361 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 NEK10Q6ZWH5 1172 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 TMEM126BQ8IUX1 230 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 ZBTB2Q8N680 514 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 EXD3Q8N9H8 876 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 SLC38A9Q8NBW4 561 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 OR1L3Q8NH93 324 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 CFAP61Q8NHU2 1237 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 FAM167BQ9BTA0 163 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 SEMA4CQ9C0C4 833 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 AKIRIN1Q9H9L7 192 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 FAM60AQ9NP50 221 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 C20orf96Q9NUD7 363 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 GALPQ9UBC7 116 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 SERTAD3Q9UJW9 196 aa16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.6■□□□□ 0.25
SFSWAP-205ENST00000537164 PCM1Q15154 2024 aa16.59■□□□□ 0.25
SFSWAP-205ENST00000537164 FER1L5A0AVI2 2057 aa16.59■□□□□ 0.25
SFSWAP-205ENST00000537164 TMEM150CB9EJG8 249 aa16.59■□□□□ 0.25
SFSWAP-205ENST00000537164 NKX2-8O15522 239 aa16.59■□□□□ 0.25
SFSWAP-205ENST00000537164 TCN2P20062 427 aa16.59■□□□□ 0.25
SFSWAP-205ENST00000537164 RORAP35398 523 aa16.59■□□□□ 0.25
SFSWAP-205ENST00000537164 CDC20Q12834 499 aa16.59■□□□□ 0.25
SFSWAP-205ENST00000537164 HSP90AA5PQ58FG0 334 aa16.59■□□□□ 0.25
SFSWAP-205ENST00000537164 HIBCHQ6NVY1 386 aaPredicted RBP16.59■□□□□ 0.25
SFSWAP-205ENST00000537164 KCNMB4Q86W47 210 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms