RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 PARP6Q2NL67 630 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 P3H1Q32P28 736 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 LETMD1Q6P1Q0 360 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 TMEM71Q6P5X7 295 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 WDR74Q6RFH5 385 aaPredicted RBP6.89□□□□□ -1.31
YBX3-206ENST00000536823 ABRAXAS1Q6UWZ7 409 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 TMEM26Q6ZUK4 368 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 GPR155Q7Z3F1 870 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 TRIM48Q8IWZ4 208 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 RASGEF1AQ8N9B8 481 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 RCBTB1Q8NDN9 531 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 OR13C4Q8NGS5 318 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 ZNF398Q8TD17 642 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 ULK4Q96C45 1275 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 TTC25Q96NG3 672 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 TMEM121Q9BTD3 319 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 FRMD8P1Q9BZ68 369 aaPredicted RBP6.89□□□□□ -1.31
YBX3-206ENST00000536823 LRRC40Q9H9A6 602 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 POT1Q9NUX5 634 aa6.89□□□□□ -1.31
YBX3-206ENST00000536823 MN1Q10571 1320 aaPredicted RBP6.89□□□□□ -1.31
YBX3-206ENST00000536823 MYO18BQ8IUG5 2567 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 NBASA2RRP1 2371 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 OR52A4PA6NMU1 304 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 B4E171 279 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 AGRPO00253 132 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 PSMD3O43242 534 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 LDB2O43679 373 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 LIASO43766 372 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 SRP72O76094 671 aaKnown RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 METTL18O95568 372 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 AP2A1O95782 977 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 VIPP01282 170 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 CCDC175P0C221 793 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 LIPCP11150 499 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 FGF3P11487 239 aaPredicted RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 XRCC1P18887 633 aaPredicted RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 MSH3P20585 1137 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 ITGALP20701 1170 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 IDSP22304 550 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 CD82P27701 267 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 CSTF2P33240 577 aaKnown RBP eCLIP6.88□□□□□ -1.31
YBX3-206ENST00000536823 HADHAP40939 763 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 TSPAN7P41732 249 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 HALP42357 657 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 MAPK9P45984 424 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 PPM1FP49593 454 aaPredicted RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 MAPK10P53779 464 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 CXADRP78310 365 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 SPARCL1Q14515 664 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 RPS6KA1Q15418 735 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 SEPT7Q16181 437 aaKnown RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 LONRF2Q1L5Z9 754 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 BBS9Q3SYG4 887 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 BCL7AQ4VC05 210 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 SOWAHCQ53LP3 525 aaPredicted RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 TMEM220Q6QAJ8 160 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 ZNF662Q6ZS27 426 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 ARHGAP22Q7Z5H3 698 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 AMZ2Q86W34 360 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 SLC13A5Q86YT5 568 aaPredicted RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 CREG2Q8IUH2 290 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 RBM12BQ8IXT5 1001 aaKnown RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 NXPE1Q8N323 547 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 SNRNP27Q8WVK2 155 aaKnown RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 NCSTNQ92542 709 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 USP7Q93009 1102 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 ART4Q93070 314 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 CXorf40BQ96DE9 158 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 ZNF514Q96K75 400 aaPredicted RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 DNAJC1Q96KC8 554 aaKnown RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 BBC3Q96PG8 261 aaPredicted RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 ALS2CR12Q96Q35 445 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 CCNL2Q96S94 520 aaPredicted RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 TBC1D10AQ9BXI6 508 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 CPNE5Q9HCH3 593 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 FOXJ2Q9P0K8 574 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 ZNF624Q9P2J8 865 aaPredicted RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 SUCOQ9UBS9 1254 aaKnown RBP6.88□□□□□ -1.31
YBX3-206ENST00000536823 CRLS1Q9UJA2 301 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 PCDHGA3Q9Y5H0 932 aa6.88□□□□□ -1.31
YBX3-206ENST00000536823 IGLV3-16A0A075B6K0 115 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 TRBV5-4A0A0C4DH59 114 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 KLHL33A6NCF5 533 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 MGAT4DA6NG13 374 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 OR2AG2A6NM03 316 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 EFCAB7A8K855 629 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 ERI2A8K979 691 aaKnown RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 AGAP14A8MT82 685 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 H7C0S8 307 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 K7ENP7 123 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 CCL22O00626 93 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 SGTAO43765 313 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 NRDCO43847 1150 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 POP7O75817 140 aaKnown RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 IFNB1P01574 187 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 C9P02748 559 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 ANKRD34CP0C6C1 535 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 RALBP11234 206 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 SPTBP11277 2137 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 PSMA3P25788 255 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms