RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	MYADM	Q96S97	322 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	LRRC1	Q9BTT6	524 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	UPF2	Q9HAU5	1272 aa	Known RBP	5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	TCF7L2	Q9NQB0	619 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	TMED3	Q9Y3Q3	217 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	PCDH11Y	Q9BZA8	1340 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	IGLV5-45	A0A087WSX0	123 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	CTAGE9	A4FU28	777 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	PRAC2	D3DTV9	90 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	PI4K2B	G5E9Z4	385 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	TULP2	O00295	520 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	PSMD14	O00487	310 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	INSIG1	O15503	277 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	CTSV	O60911	334 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	SIX3	O95343	332 aa	Predicted RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	PPP1R3D	O95685	299 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	CSN3	P07498	182 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	CTAGE8	P0CG41	777 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	HAPLN1	P10915	354 aa	Predicted RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	HSPA8	P11142	646 aa	Known RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	VDR	P11473	427 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	TCF4	P15884	667 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	WNT5A	P41221	380 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	THBS3	P49746	956 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	NAGLU	P54802	743 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	CDH11	P55287	796 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	TUBB4B	P68371	445 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	EEF1A2	Q05639	463 aa	Known RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	ITGA7	Q13683	1181 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	SLMAP	Q14BN4	828 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	UGCG	Q16739	394 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	PHLDA2	Q53GA4	152 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	PRSS57	Q6UWY2	283 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	LINGO4	Q6UY18	593 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	ZNF852	Q6ZMS4	543 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	OTOA	Q7RTW8	1153 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	PIWIL3	Q7Z3Z3	882 aa	Known RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	HOOK3	Q86VS8	718 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	CTAGE4	Q8IX94	777 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	RYBP	Q8N488	228 aa	Predicted RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	DNAJC22	Q8N4W6	341 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	NPEPL1	Q8NDH3	523 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	VANGL1	Q8TAA9	524 aa	Predicted RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	C9orf43	Q8TAL5	461 aa	Predicted RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	FGFBP3	Q8TAT2	258 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	GRAPL	Q8TC17	118 aa	Predicted RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	ZNF473	Q8WTR7	871 aa	Known RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	IRGQ	Q8WZA9	623 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	ST6GALNAC6	Q969X2	333 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	BSCL2	Q96G97	398 aa	Predicted RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	SPATA33	Q96N06	139 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	MMADHC	Q9H3L0	296 aa	Predicted RBP	5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	EVA1A	Q9H8M9	152 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	PELI2	Q9HAT8	420 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	CD93	Q9NPY3	652 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	ERAP1	Q9NZ08	941 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	TXNDC16	Q9P2K2	825 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	LRWD1	Q9UFC0	647 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	MTUS1	Q9ULD2	1270 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710	SLC7A7	Q9UM01	511 aa		5.06	□□□□□ -1.6
PRKDC-208	ENST00000536710		A0A1W2PPI3	338 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710		A0A1W2PPW3	197 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710		A4D1N5	150 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	C16orf97	H3BN30	126 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	DNM1L	O00429	736 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	CAPN9	O14815	690 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	LUC7L3	O95232	432 aa	Known RBP	5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	IGHV4-39	P01824	125 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	INHBA	P08476	426 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	CETP	P11597	493 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	TKT	P29401	623 aa	Known RBP	5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	PTGER4	P35408	488 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	TCF7	P36402	384 aa	Predicted RBP	5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	HSD17B3	P37058	310 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	HOXA1	P49639	335 aa	Predicted RBP	5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	PITX1	P78337	314 aa	Predicted RBP	5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	DLK1	P80370	383 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	MAT1A	Q00266	395 aa	Known RBP	5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	ZNF415	Q09FC8	603 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	KIR2DS3	Q14952	304 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	ZNF585B	Q52M93	769 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	TMEM182	Q6ZP80	229 aa	Predicted RBP	5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	TMEM139	Q8IV31	216 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	NHLRC2	Q8NBF2	726 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	ATAD1	Q8NBU5	361 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	OR13A1	Q8NGR1	328 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	CTCFL	Q8NI51	663 aa	Predicted RBP	5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	PROX1	Q92786	737 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	C17orf77	Q96MU5	243 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	RAD9A	Q99638	391 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	RTP3	Q9BQQ7	232 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	SLC2A11	Q9BYW1	496 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	DNAI2	Q9GZS0	605 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	MIS12	Q9H081	205 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	C2orf40	Q9H1Z8	148 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	ARRDC1-AS1	Q9H2J1	176 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	SNX25	Q9H3E2	840 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	RETREG1	Q9H6L5	497 aa		5.05	□□□□□ -1.6
PRKDC-208	ENST00000536710	CACNG4	Q9UBN1	327 aa		5.05	□□□□□ -1.6

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