RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 C6orf10Q5SRN2 563 aa22.11■■□□□ 1.13
HMGA2-206ENST00000536545 PRAMEF9Q5VWM5 478 aa22.11■■□□□ 1.13
HMGA2-206ENST00000536545 ZFP1Q6P2D0 407 aa22.11■■□□□ 1.13
HMGA2-206ENST00000536545 NUDT18Q6ZVK8 323 aa22.11■■□□□ 1.13
HMGA2-206ENST00000536545 TRAPPC5Q8IUR0 188 aa22.11■■□□□ 1.13
HMGA2-206ENST00000536545 PPFIBP2Q8ND30 876 aa22.11■■□□□ 1.13
HMGA2-206ENST00000536545 LRRC58Q96CX6 371 aa22.11■■□□□ 1.13
HMGA2-206ENST00000536545 LINC00615Q96LM1 132 aaPredicted RBP22.11■■□□□ 1.13
HMGA2-206ENST00000536545 RIPOR3Q96MK2 946 aa22.11■■□□□ 1.13
HMGA2-206ENST00000536545 ATG10Q9H0Y0 220 aa22.11■■□□□ 1.13
HMGA2-206ENST00000536545 IL1RL2Q9HB29 575 aa22.11■■□□□ 1.13
HMGA2-206ENST00000536545 STOX2Q9P2F5 926 aaPredicted RBP22.11■■□□□ 1.13
HMGA2-206ENST00000536545 LEF1Q9UJU2 399 aaPredicted RBP22.11■■□□□ 1.13
HMGA2-206ENST00000536545 NME4O00746 187 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 NPC1O15118 1278 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 MID1O15344 667 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 AP1G1O43747 822 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 SLC2A4P14672 509 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 ACADSP16219 412 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 WASP42768 502 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 TAS2R38P59533 333 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 MRPS22P82650 360 aaKnown RBP22.1■■□□□ 1.13
HMGA2-206ENST00000536545 TRAP1Q12931 704 aaKnown RBP22.1■■□□□ 1.13
HMGA2-206ENST00000536545 MAD2L1Q13257 205 aaPredicted RBP22.1■■□□□ 1.13
HMGA2-206ENST00000536545 CST6Q15828 149 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 CPSF6Q16630 551 aaKnown RBP eCLIP22.1■■□□□ 1.13
HMGA2-206ENST00000536545 CCSMST1Q4G0I0 132 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 C2orf27AQ580R0 203 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 SGO1Q5FBB7 561 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 ADAMTSL4Q6UY14 1074 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 ZNF547Q8IVP9 402 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 ATL1Q8WXF7 558 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 ZNF514Q96K75 400 aaPredicted RBP22.1■■□□□ 1.13
HMGA2-206ENST00000536545 CCDC138Q96M89 665 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 ACPTQ9BZG2 426 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 LRTM1Q9HBL6 345 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 PSMD13Q9UNM6 376 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 DYTNA2CJ06 578 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 GRXCR2A6NFK2 248 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 H3BM21 787 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 ATP6V1C1P21283 382 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 GNPDA1P46926 289 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 GTF2H3Q13889 308 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 IMPG1Q17R60 797 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 PAGE3Q5JUK9 113 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 CHPFQ8IZ52 775 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 ZNF513Q8N8E2 541 aaPredicted RBP22.1■■□□□ 1.13
HMGA2-206ENST00000536545 PLA2G15Q8NCC3 412 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 FBXO15Q8NCQ5 510 aaPredicted RBP22.1■■□□□ 1.13
HMGA2-206ENST00000536545 EZH1Q92800 747 aaPredicted RBP22.1■■□□□ 1.13
HMGA2-206ENST00000536545 NAF1Q96HR8 494 aaKnown RBP22.1■■□□□ 1.13
HMGA2-206ENST00000536545 COX14Q96I36 57 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 MAGEB10Q96LZ2 347 aaPredicted RBP22.1■■□□□ 1.13
HMGA2-206ENST00000536545 ZNHIT2Q9UHR6 403 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 SNX6Q9UNH7 406 aa22.1■■□□□ 1.13
HMGA2-206ENST00000536545 VEGFDO43915 354 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 PDYNP01213 254 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 C8BP07358 591 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 ZNF8P17098 575 aaPredicted RBP22.09■■□□□ 1.13
HMGA2-206ENST00000536545 SLC6A2P23975 617 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 NFYCQ13952 458 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 CAPRIN1Q14444 709 aaKnown RBP22.09■■□□□ 1.13
HMGA2-206ENST00000536545 AGTRAPQ6RW13 159 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 CACUL1Q86Y37 369 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 GALNT13Q8IUC8 556 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 SLC15A3Q8IY34 581 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 FOPNLQ96NB1 174 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 PCDHAC1Q9H158 963 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 CMTM6Q9NX76 183 aa22.09■■□□□ 1.13
HMGA2-206ENST00000536545 EIF3LQ9Y262 564 aaKnown RBP22.09■■□□□ 1.13
HMGA2-206ENST00000536545 CASQ2O14958 399 aaPredicted RBP22.08■■□□□ 1.13
HMGA2-206ENST00000536545 UGDHO60701 494 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 RSL1D1O76021 490 aaKnown RBP22.08■■□□□ 1.13
HMGA2-206ENST00000536545 ADH1BP00325 375 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 MTHFRP42898 656 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 TNFRSF4P43489 277 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 KIR2DL1P43626 348 aaPredicted RBP22.08■■□□□ 1.13
HMGA2-206ENST00000536545 ATXN3P54252 364 aaPredicted RBP22.08■■□□□ 1.13
HMGA2-206ENST00000536545 MTSS1LQ765P7 747 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 DPP10Q8N608 796 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 OR56A3Q8NH54 315 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 HIC2Q96JB3 615 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 PKP4Q99569 1192 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 ELOVL6Q9H5J4 265 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 C1orf109Q9NX04 203 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 GMPR2Q9P2T1 348 aaKnown RBP22.08■■□□□ 1.13
HMGA2-206ENST00000536545 TICRRQ7Z2Z1 1910 aa22.08■■□□□ 1.13
HMGA2-206ENST00000536545 SERTM1A2A2V5 107 aa22.07■■□□□ 1.12
HMGA2-206ENST00000536545 NPIPB8E9PQR5 432 aa22.07■■□□□ 1.12
HMGA2-206ENST00000536545 K7EQS6 105 aa22.07■■□□□ 1.12
HMGA2-206ENST00000536545 RPSAP08865 295 aaKnown RBP22.07■■□□□ 1.12
HMGA2-206ENST00000536545 HSD17B1P14061 328 aa22.07■■□□□ 1.12
HMGA2-206ENST00000536545 PRPH2P23942 346 aa22.07■■□□□ 1.12
HMGA2-206ENST00000536545 VARSP26640 1264 aaKnown RBP22.07■■□□□ 1.12
HMGA2-206ENST00000536545 IMPA1P29218 277 aa22.07■■□□□ 1.12
HMGA2-206ENST00000536545 GALK1P51570 392 aa22.07■■□□□ 1.12
HMGA2-206ENST00000536545 CCR3P51677 355 aa22.07■■□□□ 1.12
HMGA2-206ENST00000536545 SPATS1Q496A3 300 aa22.07■■□□□ 1.12
HMGA2-206ENST00000536545 THOC6Q86W42 341 aaKnown RBP22.07■■□□□ 1.12
HMGA2-206ENST00000536545 PQLC1Q8N2U9 271 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms