RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 CHRM3P20309 590 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 OGNP20774 298 aaKnown RBP13.79□□□□□ -0.2
UBE3B-206ENST00000536398 PKLRP30613 574 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 SLC1A2P43004 574 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 MPP1Q00013 466 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 THOC5Q13769 683 aaKnown RBP13.79□□□□□ -0.2
UBE3B-206ENST00000536398 TMED2Q15363 201 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 HSP90AA5PQ58FG0 334 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 ACSBG2Q5FVE4 666 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 HP1BP3Q5SSJ5 553 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-206ENST00000536398 TMTC4Q5T4D3 741 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 RNF187Q5TA31 235 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-206ENST00000536398 ARMC3Q5W041 872 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 LCN10Q6JVE6 187 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 ZNF549Q6P9A3 640 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 UNC5DQ6UXZ4 953 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 CDHR3Q6ZTQ4 885 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 TAX1BP1Q86VP1 789 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 ZNF843Q8N446 348 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 LSM14AQ8ND56 463 aaKnown RBP13.79□□□□□ -0.2
UBE3B-206ENST00000536398 CT55Q8WUE5 264 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 SKA2Q8WVK7 121 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-206ENST00000536398 KIAA1143Q96AT1 154 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-206ENST00000536398 WBP1Q96G27 269 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 TRIM51Q9BSJ1 452 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 LHX9Q9NQ69 397 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 OR6C2Q9NZP2 312 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 PADI1Q9ULC6 663 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 FAM169AQ9Y6X4 670 aa13.79□□□□□ -0.2
UBE3B-206ENST00000536398 TTI1O43156 1089 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 KATNA1O75449 491 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 FAM87AP0C7U9 286 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 CCNYL3P0C7X3 344 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 OAS2P29728 719 aaKnown RBP13.78□□□□□ -0.2
UBE3B-206ENST00000536398 RAB28P51157 221 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 CLCN7P51798 805 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 ADARP55265 1226 aaKnown RBP13.78□□□□□ -0.2
UBE3B-206ENST00000536398 DR1Q01658 176 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 GPS2Q13227 327 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 GBX1Q14549 363 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 LONRF1Q17RB8 773 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 BBS9Q3SYG4 887 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 PLEKHS1Q5SXH7 462 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 C16orf46Q6P387 395 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 CNSTQ6PJW8 725 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 BPHLQ86WA6 291 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-206ENST00000536398 TMEM126BQ8IUX1 230 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 DCUN1D3Q8IWE4 304 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 ZBTB2Q8N680 514 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 FCRL4Q96PJ5 515 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 PLAC1Q9HBJ0 212 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 IARS2Q9NSE4 1012 aaKnown RBP13.78□□□□□ -0.2
UBE3B-206ENST00000536398 INTS10Q9NVR2 710 aaKnown RBP13.78□□□□□ -0.2
UBE3B-206ENST00000536398 MED16Q9Y2X0 877 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 KALRNO60229 2985 aa13.78□□□□□ -0.2
UBE3B-206ENST00000536398 ZNF891A8MT65 544 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-206ENST00000536398 KPNA5O15131 536 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 HAUS5O94927 633 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 C1orf105O95561 183 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 ITGB2P05107 769 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 FURINP09958 794 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 ERVK-10P10266 1014 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 SPTBP11277 2137 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 PGAM1P18669 254 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 TCN2P20062 427 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 CD9P21926 228 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 CRYMQ14894 314 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 DEFB110Q30KQ9 67 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 CYB5D1Q6P9G0 228 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 PCGF5Q86SE9 256 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 HOOK3Q86VS8 718 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 C19orf47Q8N9M1 422 aaKnown RBP13.77□□□□□ -0.21
UBE3B-206ENST00000536398 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.77□□□□□ -0.21
UBE3B-206ENST00000536398 GIMAP7Q8NHV1 300 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 GSDMBQ8TAX9 411 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 DENND1AQ8TEH3 1009 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 STARD8Q92502 1023 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 KRT12Q99456 494 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 EBNA1BP2Q99848 306 aaKnown RBP13.77□□□□□ -0.21
UBE3B-206ENST00000536398 WDR83Q9BRX9 315 aaKnown RBP13.77□□□□□ -0.21
UBE3B-206ENST00000536398 TRIM31Q9BZY9 425 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 SPRTNQ9H040 489 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-206ENST00000536398 SLC17A6Q9P2U8 582 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 FBXO5Q9UKT4 447 aa13.77□□□□□ -0.21
UBE3B-206ENST00000536398 A0A0J9YY10 115 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 H3BMM5 538 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 RASGRF2O14827 1237 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 PFDN6O15212 129 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 TP73O15350 636 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 CPNE3O75131 537 aaKnown RBP13.76□□□□□ -0.21
UBE3B-206ENST00000536398 MATN4O95460 622 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 MT-ND3P03897 115 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 RPN2P04844 631 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 GABRB3P28472 473 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 PAFAH1B1P43034 410 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 GABRA4P48169 554 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 ITGA8P53708 1063 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 RPS18P62269 152 aaKnown RBP13.76□□□□□ -0.21
UBE3B-206ENST00000536398 CDC20Q12834 499 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 DNASE1L3Q13609 305 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms