RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ZNF404Q494X3 552 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 ANKRD34AQ69YU3 496 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 C16orf59Q7L2K0 433 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 CLEC14AQ86T13 490 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 OR52K2Q8NGK3 314 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 CNIH3Q8TBE1 160 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 LRRC20Q8TCA0 184 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 AUTS2Q8WXX7 1259 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 TMBIM1Q969X1 311 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 BTBD2Q9BX70 525 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 DCSTAMPQ9H295 470 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 SYTL2Q9HCH5 934 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 GIMAP2Q9UG22 337 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 USP22Q9UPT9 525 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 ACOT9Q9Y305 439 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 A0A0J9YYE9 177 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 FAM92AA1XBS5 289 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 WASH4PA8MWX3 477 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 SLC1A7O00341 560 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 APOA4P06727 396 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 SLC35E2BP0CK96 405 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 STMN1P16949 149 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 IL32P24001 234 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 ALDH3A2P51648 485 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 NRG1Q02297 640 aaPredicted RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 CLEC6AQ6EIG7 209 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 HS3ST5Q8IZT8 346 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 ITCHQ96J02 903 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 POMKQ9H5K3 350 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 RANGRFQ9HD47 186 aaPredicted RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 TAS2R9Q9NYW1 312 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 ZFP37Q9Y6Q3 630 aaPredicted RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 NYNRINQ9P2P1 1898 aaKnown RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 ATP6V1G2-DDX39BF2Z307 99 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 PGLSO95336 258 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 PRLP01236 227 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 MAGEA12P43365 314 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 ARSDP51689 593 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 CD83Q01151 205 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 IL5RAQ01344 420 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 TAGLNQ01995 201 aaKnown RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 GALNT1Q10472 559 aaPredicted RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 FRG1Q14331 258 aaKnown RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 TPRG1LQ5T0D9 272 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 TTC23Q5W5X9 447 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 RBM23Q86U06 439 aaKnown RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 OR8H2Q8N162 312 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 PARP16Q8N5Y8 322 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 ZBTB20Q9HC78 741 aaPredicted RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 TNFRSF12AQ9NP84 129 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 MAP10Q9P2G4 905 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 EVLQ9UI08 416 aaPredicted RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 VPS4AQ9UN37 437 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 FNDC3AQ9Y2H6 1198 aaKnown RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 A8MUA0 341 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 EFCAB9A8MZ26 197 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 TSPAN4O14817 238 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 YES1P07947 543 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 MMP2P08253 660 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 ST13P50502 369 aaKnown RBP13.69□□□□□ -0.22
LIG1-203ENST00000536218 TLE2Q04725 743 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 SERINC3Q13530 473 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 CSHL1Q14406 222 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 UGP2Q16851 508 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 BCL7AQ4VC05 210 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 SIRPB2Q5JXA9 342 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 IRAK1BP1Q5VVH5 260 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 UBQLNLQ8IYU4 475 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 FBXL6Q8N531 539 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 FAM118AQ9NWS6 357 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 FBXL12Q9NXK8 326 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 OPTCQ9UBM4 332 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 CRYL1Q9Y2S2 319 aa13.69□□□□□ -0.22
LIG1-203ENST00000536218 ANKRD12Q6UB98 2062 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 IMPDH1P20839 514 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 CYP2A7P20853 494 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 PCMT1P22061 227 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 FMO3P31513 532 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 RAB10P61026 200 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 SNRPD2P62316 118 aaKnown RBP13.68□□□□□ -0.22
LIG1-203ENST00000536218 IL1RL1Q01638 556 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 HSPA14Q0VDF9 509 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 EIF2B5Q13144 721 aaKnown RBP13.68□□□□□ -0.22
LIG1-203ENST00000536218 PLD1Q13393 1074 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 KRR1Q13601 381 aaKnown RBP13.68□□□□□ -0.22
LIG1-203ENST00000536218 YIF1BQ5BJH7 314 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 NOXA1Q86UR1 476 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 FUNDC1Q8IVP5 155 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 CENPLQ8N0S6 344 aaPredicted RBP13.68□□□□□ -0.22
LIG1-203ENST00000536218 GLB1L3Q8NCI6 653 aaPredicted RBP13.68□□□□□ -0.22
LIG1-203ENST00000536218 NEDD4LQ96PU5 975 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 PSKH2Q96QS6 385 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 TREX1Q9NSU2 369 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 NSMCE4AQ9NXX6 385 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 EHD3Q9NZN3 535 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 ZMAT5Q9UDW3 170 aaKnown RBP13.68□□□□□ -0.22
LIG1-203ENST00000536218 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 IGLV3-10A0A075B6K4 115 aa13.68□□□□□ -0.22
LIG1-203ENST00000536218 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms