RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 FER1L5A0AVI2 2057 aa13.59□□□□□ -0.23
VPS11-205ENST00000534551 ACACAQ13085 2346 aa13.58□□□□□ -0.23
VPS11-205ENST00000534551 TLX3O43711 291 aaPredicted RBP13.58□□□□□ -0.24
VPS11-205ENST00000534551 PSIP1O75475 530 aaKnown RBP13.58□□□□□ -0.24
VPS11-205ENST00000534551 CAPNS1P04632 268 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 JMJD7P0C870 316 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 FGF3P11487 239 aaPredicted RBP13.58□□□□□ -0.24
VPS11-205ENST00000534551 UGT2B7P16662 529 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 SHMT2P34897 504 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 FASTKQ14296 549 aaKnown RBP13.58□□□□□ -0.24
VPS11-205ENST00000534551 UAP1Q16222 522 aaPredicted RBP13.58□□□□□ -0.24
VPS11-205ENST00000534551 CYHR1Q6ZMK1 362 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 PRSS42Q7Z5A4 293 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 CMC1Q7Z7K0 106 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 RELL1Q8IUW5 271 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 BMPERQ8N8U9 685 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 ZFPM2Q8WW38 1151 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 CTRCQ99895 268 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 APMAPQ9HDC9 416 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 SIDT1Q9NXL6 827 aaKnown RBP13.58□□□□□ -0.24
VPS11-205ENST00000534551 NSMCE4AQ9NXX6 385 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 FOXJ2Q9P0K8 574 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 SLC39A10Q9ULF5 831 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 CORO1CQ9ULV4 474 aaPredicted RBP13.58□□□□□ -0.24
VPS11-205ENST00000534551 VWA7Q9Y334 891 aa13.58□□□□□ -0.24
VPS11-205ENST00000534551 MDC1Q14676 2089 aaKnown RBP13.58□□□□□ -0.24
VPS11-205ENST00000534551 NPEPPSL1A6NEC2 478 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 TLCD2A6NGC4 264 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 C9orf172C9J069 976 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 RASGRF2O14827 1237 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 HGSO14964 777 aaPredicted RBP13.57□□□□□ -0.24
VPS11-205ENST00000534551 SPAG6O75602 509 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 SLU7O95391 586 aaKnown RBP13.57□□□□□ -0.24
VPS11-205ENST00000534551 SYF2O95926 243 aaKnown RBP13.57□□□□□ -0.24
VPS11-205ENST00000534551 MPC1LP0DKB6 136 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 ZNF37AP17032 561 aaPredicted RBP13.57□□□□□ -0.24
VPS11-205ENST00000534551 CSTF2P33240 577 aaKnown RBP eCLIP13.57□□□□□ -0.24
VPS11-205ENST00000534551 RAB28P51157 221 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 TRA2AQ13595 282 aaKnown RBP eCLIP13.57□□□□□ -0.24
VPS11-205ENST00000534551 SLMAPQ14BN4 828 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 PHKG1Q16816 387 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 ARMC6Q6NXE6 501 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 KLHL35Q6PF15 583 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 RASGRP3Q8IV61 690 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 PPFIBP2Q8ND30 876 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 ANKRD49Q8WVL7 239 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 FOPNLQ96NB1 174 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 PKP4Q99569 1192 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 GPR22Q99680 433 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 CMKLR1Q99788 373 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 DPYSL5Q9BPU6 564 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 TXLNGYQ9BZA5 131 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 RAB33BQ9H082 229 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 EPB41L4BQ9H329 900 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 ZNF768Q9H5H4 540 aaKnown RBP13.57□□□□□ -0.24
VPS11-205ENST00000534551 CCDC86Q9H6F5 360 aaKnown RBP13.57□□□□□ -0.24
VPS11-205ENST00000534551 ACSS3Q9H6R3 686 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 TXNDC16Q9P2K2 825 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 EPHA6Q9UF33 1036 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 POLG2Q9UHN1 485 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 KLHL20Q9Y2M5 609 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 PCDHGA8Q9Y5G5 932 aa13.57□□□□□ -0.24
VPS11-205ENST00000534551 ZZEF1O43149 2961 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 PIPSLA2A3N6 862 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 MYO1CO00159 1063 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 TAF4O00268 1085 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 NRP2O60462 931 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 WISP3O95389 354 aaPredicted RBP13.56□□□□□ -0.24
VPS11-205ENST00000534551 CATP04040 527 aaKnown RBP13.56□□□□□ -0.24
VPS11-205ENST00000534551 RPN2P04844 631 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 ANKRD34CP0C6C1 535 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 EBLN1P0CF75 366 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 ENO3P13929 434 aaPredicted RBP13.56□□□□□ -0.24
VPS11-205ENST00000534551 ST6GAL1P15907 406 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 CDH3P22223 829 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 PRDX3P30048 256 aaKnown RBP13.56□□□□□ -0.24
VPS11-205ENST00000534551 VSNL1P62760 191 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 YBX1P67809 324 aaKnown RBP13.56□□□□□ -0.24
VPS11-205ENST00000534551 PRKAA1Q13131 559 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 EIF3IQ13347 325 aaKnown RBP13.56□□□□□ -0.24
VPS11-205ENST00000534551 DEFB110Q30KQ9 67 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 ANKS6Q68DC2 871 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 UGT3A1Q6NUS8 523 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 NEK10Q6ZWH5 1172 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 UBE2R2Q712K3 238 aaPredicted RBP13.56□□□□□ -0.24
VPS11-205ENST00000534551 MYO1HQ8N1T3 1032 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 SPATA6LQ8N4H0 392 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 AGBL5Q8NDL9 886 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 USP7Q93009 1102 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 GRAMD1AQ96CP6 724 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 ZDHHC12Q96GR4 267 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 NAF1Q96HR8 494 aaKnown RBP13.56□□□□□ -0.24
VPS11-205ENST00000534551 OR2A14Q96R47 310 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 TWSG1Q9GZX9 223 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 KLHL42Q9P2K6 505 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 ZFHX4Q86UP3 3567 aa13.56□□□□□ -0.24
VPS11-205ENST00000534551 AHCTF1Q8WYP5 2266 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 HMX2A2RU54 273 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 SLC9B1P1A6NJY1 282 aa13.55□□□□□ -0.24
VPS11-205ENST00000534551 CDRT15L2A8MXV6 281 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms