RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ZNF490Q9ULM2 529 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-226ENST00000533820 SCN10AQ9Y5Y9 1956 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 LOC105371267A0A1B0GV96 52 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 KRT87PA6NCN2 255 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 MAP2K4P45985 399 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 GRSF1Q12849 480 aaKnown RBP eCLIP18.92■□□□□ 0.62
CAPN1-226ENST00000533820 CADM3Q8N126 398 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 NETO1Q8TDF5 533 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 TRIB2Q92519 343 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 WBP2Q969T9 261 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 YTHDF1Q9BYJ9 559 aaKnown RBP18.92■□□□□ 0.62
CAPN1-226ENST00000533820 FBXO10Q9UK96 956 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 MYO1GB0I1T2 1018 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 PRSS23O95084 383 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 ZNF682O95780 498 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 PGRP06401 933 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 SKIV2LQ15477 1246 aaKnown RBP18.92■□□□□ 0.62
CAPN1-226ENST00000533820 LAIR2Q6ISS4 152 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 SUSD1Q6UWL2 747 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 PNPT1Q8TCS8 783 aaKnown RBP18.92■□□□□ 0.62
CAPN1-226ENST00000533820 ULK4Q96C45 1275 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 TUBA1CQ9BQE3 449 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 ADGRE3Q9BY15 652 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 TMEM9Q9P0T7 183 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 EIF3LQ9Y262 564 aaKnown RBP18.92■□□□□ 0.62
CAPN1-226ENST00000533820 PRSS21Q9Y6M0 314 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 LOC100130705A0A1B0GUX0 176 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 PRMT5O14744 637 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-226ENST00000533820 TAPBPO15533 448 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 OTCP00480 354 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 TPTEP56180 551 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 RAB15P59190 212 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 ARHGEF7Q14155 803 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 PON2Q15165 354 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 GTF2IRD2BQ6EKJ0 949 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 GTF2IRD2Q86UP8 949 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 GRAMD2AQ8IUY3 354 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 TSSK3Q96PN8 268 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 PRM3Q9NNZ6 103 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 NUDT4Q9NZJ9 180 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 VPS4AQ9UN37 437 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 GABRQQ9UN88 632 aa18.92■□□□□ 0.62
CAPN1-226ENST00000533820 C16orf96A6NNT2 1141 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 LOC730098B7Z3J9 87 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 K7ERQ8 282 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 SLC25A14O95258 325 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-226ENST00000533820 CR2P20023 1033 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 DSC1Q08554 894 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 CLIP4Q8N3C7 705 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 NODALQ96S42 347 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 CLPBQ9H078 707 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 RIBC2Q9H4K1 309 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 ANKRD36A6QL64 1941 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 FAM92AA1XBS5 289 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 KDELR3O43731 214 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 ULK1O75385 1050 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 SULT1C4O75897 302 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 VNN2O95498 520 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 ATP5C1P36542 298 aaKnown RBP18.91■□□□□ 0.62
CAPN1-226ENST00000533820 SLC11A2P49281 568 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 RAPSNQ13702 412 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 PGS1Q32NB8 556 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 RTP2Q5QGT7 225 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 SERPINA9Q86WD7 417 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 RGL4Q8IZJ4 473 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 INPP5KQ9BT40 448 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 VPS9D1Q9Y2B5 631 aa18.91■□□□□ 0.62
CAPN1-226ENST00000533820 ARIH1Q9Y4X5 557 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-226ENST00000533820 PIKFYVEQ9Y2I7 2098 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 H3BNC9 293 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 ARNTLO00327 626 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 RAD51BO15315 384 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 ESR1P03372 595 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 EFNA1P20827 205 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-226ENST00000533820 JAK1P23458 1154 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 GSTM2P28161 218 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 CORO1AP31146 461 aaKnown RBP18.9■□□□□ 0.62
CAPN1-226ENST00000533820 DCTP40126 519 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 PTGER3P43115 390 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 PPP2R2BQ00005 443 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 NDUFA5Q16718 116 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 TAS1R1Q7RTX1 841 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 RASAL3Q86YV0 1011 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 LINC01599Q8WXQ3 324 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 FAM120BQ96EK7 910 aaKnown RBP18.9■□□□□ 0.62
CAPN1-226ENST00000533820 SYT17Q9BSW7 474 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 PRDM8Q9NQV8 689 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 VNN3Q9NY84 501 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 SLC1A7O00341 560 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 ADAM12O43184 909 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 MYO1DO94832 1006 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 PRAMEF1O95521 474 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 NPPAP01160 153 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 FOXD4Q12950 439 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-226ENST00000533820 SIGIRRQ6IA17 410 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 CARNMT1Q8N4J0 409 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 TTC30BQ8N4P2 665 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 SKA2Q8WVK7 121 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-226ENST00000533820 HDAC2Q92769 488 aaKnown RBP18.9■□□□□ 0.62
CAPN1-226ENST00000533820 ASB8Q9H765 288 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms