RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 ABHD6Q9BV23 337 aa2.45□□□□□ -2.02
BRCA2-205ENST00000533776 TBC1D22BQ9NU19 505 aa2.45□□□□□ -2.02
BRCA2-205ENST00000533776 ARHGEF38Q9NXL2 777 aa2.45□□□□□ -2.02
BRCA2-205ENST00000533776 NPAP1Q9NZP6 1156 aa2.45□□□□□ -2.02
BRCA2-205ENST00000533776 SUCLA2Q9P2R7 463 aaPredicted RBP2.45□□□□□ -2.02
BRCA2-205ENST00000533776 SEC63Q9UGP8 760 aaKnown RBP2.45□□□□□ -2.02
BRCA2-205ENST00000533776 AMACRQ9UHK6 382 aa2.45□□□□□ -2.02
BRCA2-205ENST00000533776 VPS28Q9UK41 221 aa2.45□□□□□ -2.02
BRCA2-205ENST00000533776 RARRES3Q9UL19 164 aa2.45□□□□□ -2.02
BRCA2-205ENST00000533776 PLAGL1Q9UM63 463 aa2.45□□□□□ -2.02
BRCA2-205ENST00000533776 ANGPTL3Q9Y5C1 460 aa2.45□□□□□ -2.02
BRCA2-205ENST00000533776 LOC101059948A0A1B0GTJ6 334 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 PRSS51A0A1B0GVH4 220 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 hCG_1807616A0A1W2PRN6 198 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 LNP1A1A4G5 178 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 ELOVL7A1L3X0 281 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 SOCS3O14543 225 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 TO15178 435 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 PAPSS1O43252 624 aaPredicted RBP2.44□□□□□ -2.02
BRCA2-205ENST00000533776 ZWINTO95229 277 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 C22orf31O95567 290 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 GSDMDP57764 484 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 PSMC6P62333 389 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 CHAF1BQ13112 559 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 WTAPQ15007 396 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 MEA1Q16626 185 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 IGSF11Q5DX21 431 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 RILPL1Q5EBL4 403 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 HYIQ5T013 277 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 FAM109BQ6ICB4 259 aaPredicted RBP2.44□□□□□ -2.02
BRCA2-205ENST00000533776 KBTBD6Q86V97 674 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 MCEMP1Q8IX19 187 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 CPSF7Q8N684 471 aaKnown RBP2.44□□□□□ -2.02
BRCA2-205ENST00000533776 ZNF519Q8TB69 540 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 RASL10AQ92737 203 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 LRRC59Q96AG4 307 aaKnown RBP2.44□□□□□ -2.02
BRCA2-205ENST00000533776 CENPTQ96BT3 561 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 ERLEC1Q96DZ1 483 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 CALML4Q96GE6 196 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 SGK494Q96LW2 274 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 SLC22A12Q96S37 553 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 KRT12Q99456 494 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 TREX2Q9BQ50 279 aaPredicted RBP2.44□□□□□ -2.02
BRCA2-205ENST00000533776 RTN4RQ9BZR6 473 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 TRIM6Q9C030 488 aaPredicted RBP2.44□□□□□ -2.02
BRCA2-205ENST00000533776 MAF1Q9H063 256 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 PPIL3Q9H2H8 161 aaKnown RBP2.44□□□□□ -2.02
BRCA2-205ENST00000533776 ATP13A3Q9H7F0 1226 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 HHATLQ9HCP6 504 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 A4GALTQ9NPC4 353 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 LARSQ9P2J5 1176 aaKnown RBP2.44□□□□□ -2.02
BRCA2-205ENST00000533776 THEGQ9P2T0 379 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 HACL1Q9UJ83 578 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 PPP1R3CQ9UQK1 317 aa2.44□□□□□ -2.02
BRCA2-205ENST00000533776 PTRH2Q9Y3E5 179 aaKnown RBP2.44□□□□□ -2.02
BRCA2-205ENST00000533776 ASTN2O75129 1339 aaPredicted RBP2.43□□□□□ -2.02
BRCA2-205ENST00000533776 RSF1Q96T23 1441 aaPredicted RBP2.43□□□□□ -2.02
BRCA2-205ENST00000533776 IGHV3OR16-10A0A075B7F0 116 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 A0A1W2PN81 502 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 ANKRD18BA2A2Z9 1011 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 OR2A25A4D2G3 310 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 MSGN1A6NI15 193 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 EPM2AB3EWF7 344 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 PRKRAO75569 313 aaKnown RBP2.43□□□□□ -2.02
BRCA2-205ENST00000533776 TSPAN9O75954 239 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 GFPT2O94808 682 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 KRTAP1-4P0C5Y4 121 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 CSH1P0DML2 217 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 CSH2P0DML3 217 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 PRG2P13727 222 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 ALOX12P18054 663 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 CA4P22748 312 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 CHRNA7P36544 502 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 NRIP1P48552 1158 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 PGFP49763 221 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 CLNS1AP54105 237 aaKnown RBP2.43□□□□□ -2.02
BRCA2-205ENST00000533776 PNLIPRP2P54317 469 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 EIF5P55010 431 aaKnown RBP2.43□□□□□ -2.02
BRCA2-205ENST00000533776 PAX9P55771 341 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 HUNKP57058 714 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 PRKCZQ05513 592 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 CXCL9Q07325 125 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 DMPKQ09013 629 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 LMOD3Q0VAK6 560 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 NFATC2Q13469 925 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 MELKQ14680 651 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 MAPRE1Q15691 268 aaKnown RBP2.43□□□□□ -2.02
BRCA2-205ENST00000533776 PLEKHS1Q5SXH7 462 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 TMCO3Q6UWJ1 677 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 Q6ZRP5 223 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 HAUS6Q7Z4H7 955 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 LDB1Q86U70 411 aaPredicted RBP2.43□□□□□ -2.02
BRCA2-205ENST00000533776 ADIPOR2Q86V24 386 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 HPS6Q86YV9 775 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 FAM114A1Q8IWE2 563 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 RPAP2Q8IXW5 612 aaPredicted RBP2.43□□□□□ -2.02
BRCA2-205ENST00000533776 TAGAPQ8N103 731 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 FBXO39Q8N4B4 442 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 NIPA2Q8N8Q9 360 aa2.43□□□□□ -2.02
BRCA2-205ENST00000533776 POC5Q8NA72 575 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms