RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 TRUB1Q8WWH5 349 aaKnown RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 PPWD1Q96BP3 646 aaKnown RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 ZNF668Q96K58 619 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 GATA5Q9BWX5 397 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 FAM49AQ9H0Q0 323 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 SNX25Q9H3E2 840 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 RIBC2Q9H4K1 309 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 LRRC40Q9H9A6 602 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 RGS18Q9NS28 235 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 UCKL1Q9NWZ5 548 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 TRNAU1APQ9NX07 287 aaKnown RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 BFARQ9NZS9 450 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 RIMS3Q9UJD0 308 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CNOT11Q9UKZ1 510 aaKnown RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 AP4E1Q9UPM8 1137 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 TRBV23-1A0A0A0MS06 115 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 H3BNC9 293 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 AKR7A3O95154 331 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 H6PDO95479 791 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CYC1P08574 325 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 NFICP08651 508 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 STAG3L3P0CL85 134 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 MCF2P10911 925 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 GABRB3P28472 473 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 RCVRNP35243 200 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 GDI2P50395 445 aaKnown RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 PRKAA2P54646 552 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 PRRX1P54821 245 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CDKL1Q00532 357 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 ZNF177Q13360 481 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CEACAM7Q14002 265 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 GK3PQ14409 553 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 GPNMBQ14956 572 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 RNFT1Q5M7Z0 435 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 TRNP1Q6NT89 227 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 PID1Q7Z2X4 250 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 ADAMTSL2Q86TH1 951 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 STX12Q86Y82 276 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 HERC6Q8IVU3 1022 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 DENND6AQ8IWF6 608 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CNTN4Q8IWV2 1026 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 SCUBE3Q8IX30 993 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 TAGAPQ8N103 731 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 MINDY1Q8N5J2 469 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 C1orf127Q8N9H9 656 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 FIBINQ8TAL6 211 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 MAPK15Q8TD08 544 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 KBTBD7Q8WVZ9 684 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 RMND5BQ96G75 393 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 MSANTD3Q96H12 275 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 PDLIM5Q96HC4 596 aaKnown RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CITED2Q99967 270 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 TMEM79Q9BSE2 394 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CINPQ9BW66 212 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 OSBPL11Q9BXB4 747 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 OSGEPL1Q9H4B0 414 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 TASP1Q9H6P5 420 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 SIAEQ9HAT2 523 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 BRF2Q9HAW0 419 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 SYBUQ9NX95 663 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 ANKMY1Q9P2S6 941 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 MBD2Q9UBB5 411 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 SIX4Q9UIU6 781 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 TMPRSS11EQ9UL52 423 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 AP4S1Q9Y587 144 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 PCDHB11Q9Y5F2 797 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 PDE4DIPQ5VU43 2346 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 ZNF487B1APH4 448 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 TRIM77I1YAP6 450 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 RNF103O00237 685 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 GPRIN2O60269 458 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 JRKO75564 520 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 UBXN7O94888 489 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CHEK2O96017 543 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 C2P06681 752 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 MMP2P08253 660 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 OSMP13725 252 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 PRKCAP17252 672 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 POLR2CP19387 275 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CYP2A7P20853 494 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 ARRB2P32121 409 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 GPC1P35052 558 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 GRIA4P48058 902 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 STARP49675 285 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 LIMK2P53671 638 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 HTRA4P83105 476 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 MS4A2Q01362 244 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CD300CQ08708 224 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 SLC10A2Q12908 348 aaPredicted RBP5.32□□□□□ -1.56
CKAP5-212ENST00000533413 SELENBP1Q13228 472 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 MGAT5BQ3V5L5 792 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 C10orf120Q5SQS8 335 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 C9orf50Q5SZB4 431 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 ZNF697Q5TEC3 545 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 KANK2Q63ZY3 851 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 NAPRTQ6XQN6 538 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 GPR141Q7Z602 305 aa5.32□□□□□ -1.56
CKAP5-212ENST00000533413 CUZD1Q86UP6 607 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms