RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 HIBCHQ6NVY1 386 aaPredicted RBP16.13■□□□□ 0.17
PKP3-209ENST00000533069 SPESP1Q6UW49 350 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 CES3Q6UWW8 571 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 DCUN1D3Q8IWE4 304 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 UNC5BQ8IZJ1 945 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 ZNF501Q96CX3 271 aaPredicted RBP16.13■□□□□ 0.17
PKP3-209ENST00000533069 MED8Q96G25 268 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 CATSPER2Q96P56 530 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 ARHGAP9Q9BRR9 750 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 TRIM31Q9BZY9 425 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 DPH5Q9H2P9 285 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 ACTR10Q9NZ32 417 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 TDRKHQ9Y2W6 561 aaKnown RBP16.13■□□□□ 0.17
PKP3-209ENST00000533069 SNX24Q9Y343 169 aa16.13■□□□□ 0.17
PKP3-209ENST00000533069 UQCRHLA0A096LP55 91 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 IQCF5A8MTL0 148 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 CPNE3O75131 537 aaKnown RBP16.12■□□□□ 0.17
PKP3-209ENST00000533069 TIAF1O95411 115 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 ESR1P03372 595 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 UQCRHP07919 91 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 MAGEA3P43357 314 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 EIF3BP55884 814 aaKnown RBP16.12■□□□□ 0.17
PKP3-209ENST00000533069 CYP4F2P78329 520 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 CBLBQ13191 982 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 GPR19Q15760 415 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 TBR1Q16650 682 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 PLEKHS1Q5SXH7 462 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 NEPROQ6NW34 567 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 EMBQ6PCB8 327 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 UNC5AQ6ZN44 842 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 OTOAQ7RTW8 1153 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 TMEM135Q86UB9 458 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 KRT222Q8N1A0 295 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 NAT8LQ8N9F0 302 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 IFT81Q8WYA0 676 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 STARD8Q92502 1023 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 LPGAT1Q92604 370 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 ZNF669Q96BR6 464 aaPredicted RBP16.12■□□□□ 0.17
PKP3-209ENST00000533069 PPM1MQ96MI6 270 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 FMO2Q99518 471 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 TWSG1Q9GZX9 223 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 GRHL1Q9NZI5 618 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.12■□□□□ 0.17
PKP3-209ENST00000533069 KCND3Q9UK17 655 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 PADI1Q9ULC6 663 aa16.12■□□□□ 0.17
PKP3-209ENST00000533069 V9GYY5 206 aaPredicted RBP16.12■□□□□ 0.17
PKP3-209ENST00000533069 GOLGA8KD6RF30 607 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 GOLGA8TH3BQL2 631 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 GOLGA8MH3BSY2 632 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 EIF3HO15372 352 aaKnown RBP eCLIP16.11■□□□□ 0.17
PKP3-209ENST00000533069 SCRG1O75711 98 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 C1QL1O75973 258 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 PRB1P04280 392 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 CHRM5P08912 532 aaPredicted RBP16.11■□□□□ 0.17
PKP3-209ENST00000533069 TPBGLP0DKB5 382 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 ST6GAL1P15907 406 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 DLSTP36957 453 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 RAB28P51157 221 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 ITGA8P53708 1063 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 LY6DQ14210 128 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 KIR2DS3Q14952 304 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 LINC00303Q3SY05 128 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 ANKRD20A4Q4UJ75 823 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 CTSL3PQ5NE16 218 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 BORAQ6PGQ7 559 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 FBXO38Q6PIJ6 1188 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 TMEM126BQ8IUX1 230 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 VRK3Q8IV63 474 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 LMNTD2Q8IXW0 634 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 EXTL1Q92935 676 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 BIRC8Q96P09 236 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 TRAPPC9Q96Q05 1148 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 NRTNQ99748 197 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 CHRNA10Q9GZZ6 450 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 LHX9Q9NQ69 397 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 INTS10Q9NVR2 710 aaKnown RBP16.11■□□□□ 0.17
PKP3-209ENST00000533069 IL17BQ9UHF5 180 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 CROTQ9UKG9 612 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 PCDHB3Q9Y5E6 796 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 PCDHGA6Q9Y5G7 932 aa16.11■□□□□ 0.17
PKP3-209ENST00000533069 C21orf140B9A014 251 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 TERTO14746 1132 aaKnown RBP16.1■□□□□ 0.17
PKP3-209ENST00000533069 USP1O94782 785 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 SFTPCP11686 197 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 UGT2B7P16662 529 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 ATP5DP30049 168 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 PKLRP30613 574 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 FMO4P31512 558 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 CARSP49589 748 aaKnown RBP16.1■□□□□ 0.17
PKP3-209ENST00000533069 PLTPP55058 493 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 ARL4CP56559 192 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 MRPS25P82663 173 aaKnown RBP16.1■□□□□ 0.17
PKP3-209ENST00000533069 CDC20Q12834 499 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 ABRQ12979 859 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 SLMAPQ14BN4 828 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 KYNUQ16719 465 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 SLC5A12Q1EHB4 618 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 TTC23LQ6PF05 361 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 CILP2Q8IUL8 1156 aa16.1■□□□□ 0.17
PKP3-209ENST00000533069 PDIK1LQ8N165 341 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms