RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 TBK1Q9UHD2 729 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 ADAMTS6Q9UKP5 1117 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 ATXN7L1Q9ULK2 861 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 PLAGL1Q9UM63 463 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 CLCA2Q9UQC9 943 aa10.91□□□□□ -0.66
TRAPPC4-211ENST00000533012 OR5K3A6NET4 321 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 ZNF839A8K0R7 811 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 ARHGEF33A8MVX0 844 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 MYO1CO00159 1063 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 MATN2O00339 956 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 BTN3A1O00481 513 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CDH16O75309 829 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 MT-ND3P03897 115 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 ENO2P09104 434 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 LTA4HP09960 611 aaKnown RBP10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 TPBGLP0DKB5 382 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 HOXB3P14651 431 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 POLR2CP19387 275 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CAPZBP47756 277 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CSHL1Q14406 222 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 GRB7Q14451 532 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 FAM83EQ2M2I3 478 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CCSMST1Q4G0I0 132 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 BEND6Q5SZJ8 279 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CDCP2Q5VXM1 449 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 RASGRP3Q8IV61 690 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CACTIN-AS1Q8N1I8 211 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 SPATA6LQ8N4H0 392 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CHCHD4Q8N4Q1 142 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 OR4D9Q8NGE8 314 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 RSC1A1Q92681 617 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 DLG3Q92796 817 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 ISL2Q96A47 359 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 GRAMD1AQ96CP6 724 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CABS1Q96KC9 395 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CCDC138Q96M89 665 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 TSNARE1Q96NA8 513 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 TMEM74Q96NL1 305 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 NUDT22Q9BRQ3 303 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 RAB33BQ9H082 229 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 SPATA7Q9P0W8 599 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 EPHA6Q9UF33 1036 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 CIDEBQ9UHD4 219 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 NOVA2Q9UNW9 492 aaKnown RBP10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 ICKQ9UPZ9 632 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 PDE10AQ9Y233 779 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 PLAAQ9Y263 795 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 ENTPD2Q9Y5L3 495 aa10.9□□□□□ -0.66
TRAPPC4-211ENST00000533012 ARID1BQ8NFD5 2236 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 PIPSLA2A3N6 862 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 C2orf74A8MZ97 194 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 D6RAR5 112 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 CDC7O00311 574 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 BTN3A3O00478 584 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 CASC3O15234 703 aaKnown RBP10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 CAPN5O15484 640 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 RFPL1O75677 317 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 KLHL2O95198 593 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 COL6A2P12110 1019 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 CD1DP15813 335 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 KRT15P19012 456 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 MPSTP25325 297 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 MAGEA12P43365 314 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 CSRP3P50461 194 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 INHBCP55103 352 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 AP1S2P56377 157 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 CFHR1Q03591 330 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 GABPB1Q06547 395 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 ARHGAP19Q14CB8 494 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 CYP2A13Q16696 494 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 HES3Q5TGS1 186 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 ANKS6Q68DC2 871 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 IRGCQ6NXR0 463 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 KLC3Q6P597 504 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZNF574Q6ZN55 896 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 FRA10AC1Q70Z53 315 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 TMPRSS7Q7RTY8 843 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 RAB44Q7Z6P3 723 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 ADAMTSL2Q86TH1 951 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 ADGRF3Q8IZF5 1079 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 IQCKQ8N0W5 287 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 RIBC1Q8N443 379 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 C2orf73Q8N5S3 287 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 OR2L8Q8NGY9 312 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 STAG3L4Q8TBR4 150 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 EPS8L3Q8TE67 593 aaKnown RBP10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 SLC22A18Q96BI1 424 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 NXNL1Q96CM4 212 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 TGM7Q96PF1 710 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 DEPDC7Q96QD5 511 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 NRTNQ99748 197 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 MENTQ9BUN1 341 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 TMEM109Q9BVC6 243 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 UNKQ9C0B0 810 aaKnown RBP10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 MED4Q9NPJ6 270 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 ARL15Q9NXU5 204 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 PDP2Q9P2J9 529 aa10.89□□□□□ -0.67
TRAPPC4-211ENST00000533012 IGHV5-10-1A0A0J9YXX1 117 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms