RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ESX1Q8N693 406 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 SPATA4Q8NEY3 305 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 BBC3Q96PG8 261 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-210ENST00000532935 FCRL4Q96PJ5 515 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 TRAPPC9Q96Q05 1148 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 OR2A14Q96R47 310 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 MENTQ9BUN1 341 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 TUBB2BQ9BVA1 445 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 TWSG1Q9GZX9 223 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 CCDC68Q9H2F9 335 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 LATS2Q9NRM7 1088 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 IARS2Q9NSE4 1012 aaKnown RBP14.87□□□□□ -0.03
CPSF1-210ENST00000532935 CIDEBQ9UHD4 219 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 LNPEPQ9UIQ6 1025 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 RUVBL2Q9Y230 463 aaKnown RBP14.87□□□□□ -0.03
CPSF1-210ENST00000532935 NFS1Q9Y697 457 aa14.87□□□□□ -0.03
CPSF1-210ENST00000532935 LOC101059948A0A1B0GTJ6 334 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 EFCAB8A8MWE9 144 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 TP73O15350 636 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 MAP3K7O43318 606 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 C1orf105O95561 183 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 ERVK-10P10266 1014 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 PVRP15151 417 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 PEBP1P30086 187 aaKnown RBP14.86□□□□□ -0.03
CPSF1-210ENST00000532935 ELK3P41970 407 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 STAT5AP42229 794 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 BDKRB1P46663 353 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 RPL21P46778 160 aaKnown RBP14.86□□□□□ -0.03
CPSF1-210ENST00000532935 CLCN7P51798 805 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 ARL4CP56559 192 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 MRPS25P82663 173 aaKnown RBP14.86□□□□□ -0.03
CPSF1-210ENST00000532935 GRB7Q14451 532 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 KIR2DS3Q14952 304 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 HIF1AQ16665 826 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 HP1BP3Q5SSJ5 553 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-210ENST00000532935 TTC23LQ6PF05 361 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 CNSTQ6PJW8 725 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 TRIM73Q86UV7 250 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 LINC01555Q8NAE3 123 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 ZSCAN1Q8NBB4 408 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 GALNT6Q8NCL4 622 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 OR8K5Q8NH50 307 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 FLVCR1-AS1Q8TAF5 88 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 GABPB2Q8TAK5 448 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-210ENST00000532935 KIAA1143Q96AT1 154 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-210ENST00000532935 ZNF501Q96CX3 271 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-210ENST00000532935 FOPNLQ96NB1 174 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 KLHL25Q9H0H3 589 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 GPN2Q9H9Y4 310 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-210ENST00000532935 FANCEQ9HB96 536 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 TSR3Q9UJK0 312 aaKnown RBP14.86□□□□□ -0.03
CPSF1-210ENST00000532935 MRFAP1Q9Y605 127 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 PIEZO2Q9H5I5 2752 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 ANKRD12Q6UB98 2062 aa14.86□□□□□ -0.03
CPSF1-210ENST00000532935 FAM187AA6NFU0 413 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 ISM1B1AKI9 464 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 ERVH48-1M5A8F1 160 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 RASGRF2O14827 1237 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 HAUS5O94927 633 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 MATN4O95460 622 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 C2orf54Q08AI8 447 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 TTLL9Q3SXZ7 439 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 ACSBG2Q5FVE4 666 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 MAATS1Q7Z4T9 603 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 C19orf47Q8N9M1 422 aaKnown RBP14.85□□□□□ -0.03
CPSF1-210ENST00000532935 C2CD4AQ8NCU7 369 aaPredicted RBP14.85□□□□□ -0.03
CPSF1-210ENST00000532935 OR2L8Q8NGY9 312 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 TTC9Q92623 222 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 KCNJ9Q92806 393 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 RAD51AP1Q96B01 352 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 LRRC39Q96DD0 335 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 CERS2Q96G23 380 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 CFAP36Q96G28 342 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 IL17FQ96PD4 163 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 SLC30A3Q99726 388 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 WDR83Q9BRX9 315 aaKnown RBP14.85□□□□□ -0.03
CPSF1-210ENST00000532935 EFHD1Q9BUP0 239 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 PLAC1Q9HBJ0 212 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 SYTL2Q9HCH5 934 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 KLHL42Q9P2K6 505 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 ZC3H7BQ9UGR2 993 aaKnown RBP14.85□□□□□ -0.03
CPSF1-210ENST00000532935 SLC39A10Q9ULF5 831 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 CHMP2BQ9UQN3 213 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 MED16Q9Y2X0 877 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 SNX24Q9Y343 169 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 COMMD10Q9Y6G5 202 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 TEX264Q9Y6I9 313 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 SEC16AO15027 2179 aa14.85□□□□□ -0.03
CPSF1-210ENST00000532935 ATRXP46100 2492 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 A0A0J9YY10 115 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 NDC80O14777 642 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 ATXN7O15265 892 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-210ENST00000532935 RAD51CO43502 376 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 SCRG1O75711 98 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 MT-ND3P03897 115 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 NTRK1P04629 796 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 MSL3P1P0C860 447 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 CD9P21926 228 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 CCNFP41002 786 aa14.84□□□□□ -0.03
CPSF1-210ENST00000532935 SLC5A12Q1EHB4 618 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms