RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 LRRC8BQ6P9F7 803 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 BPHLQ86WA6 291 aaPredicted RBP17.19■□□□□ 0.34
SMG1-203ENST00000532700 ENDOVQ8N8Q3 282 aaKnown RBP17.19■□□□□ 0.34
SMG1-203ENST00000532700 C9orf43Q8TAL5 461 aaPredicted RBP17.19■□□□□ 0.34
SMG1-203ENST00000532700 CPT1BQ92523 772 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 PEX13Q92968 403 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 IL22Q9GZX6 179 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 EPN3Q9H201 632 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 TUBD1Q9UJT1 453 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 KCND3Q9UK17 655 aa17.19■□□□□ 0.34
SMG1-203ENST00000532700 HEMK1Q9Y5R4 338 aaPredicted RBP17.19■□□□□ 0.34
SMG1-203ENST00000532700 MYO18BQ8IUG5 2567 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 C21orf140B9A014 251 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 PRMT5O14744 637 aaPredicted RBP17.18■□□□□ 0.34
SMG1-203ENST00000532700 ZNF749O43361 778 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 NIPSNAP2O75323 286 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 SLCO2B1O94956 709 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 KRT14P02533 472 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 MSL3P1P0C860 447 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 MAGEA6P43360 314 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 NPY2RP49146 381 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 EIF3BP55884 814 aaKnown RBP17.18■□□□□ 0.34
SMG1-203ENST00000532700 KYNUQ16719 465 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 ZNF449Q6P9G9 518 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 OR8K5Q8NH50 307 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 ADAMTS17Q8TE56 1095 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 LPGAT1Q92604 370 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 OSBPL9Q96SU4 736 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 ACTR5Q9H9F9 607 aaPredicted RBP17.18■□□□□ 0.34
SMG1-203ENST00000532700 TLK1Q9UKI8 766 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 SNX12Q9UMY4 172 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 SOX13Q9UN79 622 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 POLHQ9Y253 713 aa17.18■□□□□ 0.34
SMG1-203ENST00000532700 A0A0J9YY10 115 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 GOLGA8MH3BSY2 632 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 CES2O00748 559 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 ZNF185O15231 689 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 CNOT3O75175 753 aaKnown RBP17.17■□□□□ 0.34
SMG1-203ENST00000532700 CBSLP0DN79 551 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 MAGP20916 626 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 PSMB5P28074 263 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 CBSP35520 551 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 PTGIRP43119 386 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 YBX1P67809 324 aaKnown RBP17.17■□□□□ 0.34
SMG1-203ENST00000532700 TLE1Q04724 770 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 UGT8Q16880 541 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 CYB5D1Q6P9G0 228 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 CENPUQ71F23 418 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 SYTL1Q8IYJ3 562 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 DENND1AQ8TEH3 1009 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 CLIP3Q96DZ5 547 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 LRFN5Q96NI6 719 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 SLC30A3Q99726 388 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 MRM3Q9HC36 420 aaKnown RBP17.17■□□□□ 0.34
SMG1-203ENST00000532700 BFARQ9NZS9 450 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 POLG2Q9UHN1 485 aa17.17■□□□□ 0.34
SMG1-203ENST00000532700 FARSAQ9Y285 508 aaKnown RBP17.17■□□□□ 0.34
SMG1-203ENST00000532700 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.16■□□□□ 0.34
SMG1-203ENST00000532700 ISM1B1AKI9 464 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 PGRMC1O00264 195 aaKnown RBP17.16■□□□□ 0.34
SMG1-203ENST00000532700 SFTPCP11686 197 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 TCP1P17987 556 aaKnown RBP17.16■□□□□ 0.34
SMG1-203ENST00000532700 ITGAXP20702 1163 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 CYP2A7P20853 494 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 RPS3P23396 243 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMG1-203ENST00000532700 FMO4P31512 558 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 COILP38432 576 aaPredicted RBP17.16■□□□□ 0.34
SMG1-203ENST00000532700 TTPAP49638 278 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 PMS2P54278 862 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 ITGA1P56199 1179 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 CYP1B1Q16678 543 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 TYSND1Q2T9J0 566 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 DNAJC21Q5F1R6 531 aaKnown RBP17.16■□□□□ 0.34
SMG1-203ENST00000532700 C1orf189Q5VU69 101 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 IZUMO3Q5VZ72 239 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 PTRHD1Q6GMV3 140 aaKnown RBP17.16■□□□□ 0.34
SMG1-203ENST00000532700 DNAJC22Q8N4W6 341 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 DTWD1Q8N5C7 304 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 ACTRT1Q8TDG2 376 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 MAGOHBQ96A72 148 aaKnown RBP17.16■□□□□ 0.34
SMG1-203ENST00000532700 OR6C2Q9NZP2 312 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 DHCR7Q9UBM7 475 aaKnown RBP17.16■□□□□ 0.34
SMG1-203ENST00000532700 ANAPC5Q9UJX4 755 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 MAN2B2Q9Y2E5 1009 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 CRYL1Q9Y2S2 319 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 MED16Q9Y2X0 877 aa17.16■□□□□ 0.34
SMG1-203ENST00000532700 UBR5O95071 2799 aaPredicted RBP17.15■□□□□ 0.34
SMG1-203ENST00000532700 ARGFXA6NJG6 315 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 MASP2O00187 686 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 PRICKLE3O43900 615 aaPredicted RBP17.15■□□□□ 0.34
SMG1-203ENST00000532700 WISP1O95388 367 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 APOA4P06727 396 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 GCGRP47871 477 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 RAB28P51157 221 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 GBX1Q14549 363 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 SLC9A5Q14940 896 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 SLC5A12Q1EHB4 618 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 AARS2Q5JTZ9 985 aaKnown RBP17.15■□□□□ 0.34
SMG1-203ENST00000532700 FCRL6Q6DN72 434 aa17.15■□□□□ 0.34
SMG1-203ENST00000532700 KIAA0930Q6ICG6 404 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms