RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 GJB5O95377 273 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 PTDSS1P48651 473 aaKnown RBP14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 ARHGDIBP52566 201 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 RPS14P62263 151 aaKnown RBP14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 TMEM110Q86TL2 294 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 ZNF461Q8TAF7 563 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 NEUROD4Q9HD90 331 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 SNX7Q9UNH6 387 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 IRS2Q9Y4H2 1338 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 A0A0D9SEW6 157 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 RBMXL2O75526 392 aaKnown RBP14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 IQCF3P0C7M6 154 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 IGFBP5P24593 272 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 PRKCHP24723 683 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 MPIP34949 423 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 DCTN2Q13561 401 aaKnown RBP14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 QPRTQ15274 297 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 LCN1P1Q5VSP4 162 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 PAOXQ6QHF9 649 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 CAMKVQ8NCB2 501 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 S100ZQ8WXG8 99 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 C1QTNF1Q9BXJ1 281 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 GPR62Q9BZJ7 368 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 GDAP2Q9NXN4 497 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 PITPNM1O00562 1244 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 CASKO14936 926 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 IDH3BO43837 385 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 TPST2O60704 377 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 RSL1D1O76021 490 aaKnown RBP14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 ZNF865P0CJ78 1059 aaPredicted RBP14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 IL7RP16871 459 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 PQLC1Q8N2U9 271 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 IGSF21Q96ID5 467 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 HIST1H2AAQ96QV6 131 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 DSN1Q9H410 356 aa14.5□□□□□ -0.09
PCDHA9-202ENST00000532602 CCDC182A6NF36 153 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 SSNA1O43805 119 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 SLC39A5Q6ZMH5 540 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 PGAM4Q8N0Y7 254 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 Q8N9G6 341 aaPredicted RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 ROPN1LQ96C74 230 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 FCRL4Q96PJ5 515 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 RAPGEFL1Q9UHV5 662 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 CFL2Q9Y281 166 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 CLCA3PQ9Y6N3 262 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 CAPN14A8MX76 684 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 TULP3O75386 442 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 TIPRLO75663 272 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 TMEM63AO94886 807 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 VIPR1P32241 457 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 LSM3P62310 102 aaKnown RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 LIPEQ05469 1076 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 SMCO1Q147U7 214 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 REP15Q6BDI9 236 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 FSTL5Q8N475 847 aaPredicted RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 TSEN15Q8WW01 171 aaKnown RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 C1GALT1C1Q96EU7 318 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 MTERF1Q99551 399 aaKnown RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 SERINC1Q9NRX5 453 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 DNAAF2Q9NVR5 837 aaKnown RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 AP4B1Q9Y6B7 739 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 NUP98P52948 1817 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 TNFRSF21O75509 655 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 BDKRB1P46663 353 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 YAP1P46937 504 aaKnown RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 COL9A2Q14055 689 aaPredicted RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 DENND5AQ6IQ26 1287 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 CYP2U1Q7Z449 544 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 PIM3Q86V86 326 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 ATXN10Q9UBB4 475 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 DCLK1O15075 740 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 BEST1O76090 585 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 CRISP3P54108 245 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 TAS2R39P59534 338 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 OC90Q02509 493 aaPredicted RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 SOX4Q06945 474 aaPredicted RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 PTPRCAPQ14761 206 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 RASGEF1AQ8N9B8 481 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 GSTCDQ8NEC7 633 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 GPR151Q8TDV0 419 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 OTUB2Q96DC9 234 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 NKX2-4Q9H2Z4 354 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 MBD2Q9UBB5 411 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 CNMDO75829 334 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 KLK3P07288 261 aaPredicted RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 HOXB2P14652 356 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 ZNF823P16415 610 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 CSNK2A2P19784 350 aaPredicted RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 PRDX6P30041 224 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 MLLT3P42568 568 aaPredicted RBP14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 CREB5Q02930 508 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 TDRPQ86YL5 185 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 FAM46DQ8NEK8 389 aa14.49□□□□□ -0.09
PCDHA9-202ENST00000532602 C10orf71Q711Q0 1435 aa14.48□□□□□ -0.09
PCDHA9-202ENST00000532602 A8MUA0 341 aa14.48□□□□□ -0.09
PCDHA9-202ENST00000532602 COCHO43405 550 aa14.48□□□□□ -0.09
PCDHA9-202ENST00000532602 AGR2O95994 175 aa14.48□□□□□ -0.09
PCDHA9-202ENST00000532602 GPIP06744 558 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms