RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 OR5AR1Q8NGP9 310 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 CCDC110Q8TBZ0 833 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 HEXDCQ8WVB3 486 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 ULK4Q96C45 1275 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 VPS50Q96JG6 964 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 LURAP1Q96LR2 239 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 OR2A14Q96R47 310 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.89□□□□□ -0.99
NEDD8-206ENST00000531430 OR52A5Q9H2C5 316 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 VPS37BQ9H9H4 285 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 SMOXQ9NWM0 555 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 DDX56Q9NY93 547 aaKnown RBP8.89□□□□□ -0.99
NEDD8-206ENST00000531430 EURLQ9NYK6 297 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 SMARCAL1Q9NZC9 954 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 PTGFRNQ9P2B2 879 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 CIDEBQ9UHD4 219 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 CAPN11Q9UMQ6 739 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 ICKQ9UPZ9 632 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 MAU2Q9Y6X3 613 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 CSMD1Q96PZ7 3565 aa8.89□□□□□ -0.99
NEDD8-206ENST00000531430 DOCK10Q96BY6 2186 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 C17orf113A0A1B0GUU1 675 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 DYTNA2CJ06 578 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 C5orf60A6NFR6 353 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 GOLGA6L22H0YM25 854 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 SPOPO43791 374 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 DIAPH2O60879 1101 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 UNC5CO95185 931 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 PRSS56P0CW18 603 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 ESRRAP11474 423 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-206ENST00000531430 MC4RP32245 332 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 SHMT2P34897 504 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 CD151P48509 253 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 ARSFP54793 590 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 XIAPP98170 497 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 BOP1Q14137 746 aaKnown RBP8.88□□□□□ -0.99
NEDD8-206ENST00000531430 SPARCL1Q14515 664 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 PRPSAP1Q14558 356 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 NKG7Q16617 165 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 TUBB8Q3ZCM7 444 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 TFDP3Q5H9I0 405 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 FCRL6Q6DN72 434 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 SNX20Q7Z614 316 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 TAX1BP1Q86VP1 789 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 SERPINA9Q86WD7 417 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 DNAJC22Q8N4W6 341 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 CFAP61Q8NHU2 1237 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 COG1Q8WTW3 980 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 ELMO1Q92556 727 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 DLG3Q92796 817 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 GBP4Q96PP9 640 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 ZNF160Q9HCG1 818 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 CHST11Q9NPF2 352 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 SLC22A11Q9NSA0 550 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 ZDHHC3Q9NYG2 299 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 HS3ST3B1Q9Y662 390 aa8.88□□□□□ -0.99
NEDD8-206ENST00000531430 PKDREJQ9NTG1 2253 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 ITPR3Q14573 2671 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 A0A1B0GX78 115 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 ZNF487B1APH4 448 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 SOCS6O14544 535 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 ANXA9O76027 345 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 EIF2S1P05198 315 aaKnown RBP8.87□□□□□ -0.99
NEDD8-206ENST00000531430 TPH1P17752 444 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 ITGAXP20702 1163 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 MCM3P25205 808 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 RBL1P28749 1068 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 OTUD4Q01804 1114 aaKnown RBP8.87□□□□□ -0.99
NEDD8-206ENST00000531430 SF1Q15637 639 aaKnown RBP8.87□□□□□ -0.99
NEDD8-206ENST00000531430 SYTL3Q4VX76 610 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 B3GNTL1Q67FW5 361 aaPredicted RBP8.87□□□□□ -0.99
NEDD8-206ENST00000531430 IGFL2Q6UWQ7 119 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 SIRT6Q8N6T7 355 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 LMNTD1Q8N9Z9 388 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 TTC29Q8NA56 475 aaPredicted RBP8.87□□□□□ -0.99
NEDD8-206ENST00000531430 DENND1AQ8TEH3 1009 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 ITLN2Q8WWU7 325 aaPredicted RBP8.87□□□□□ -0.99
NEDD8-206ENST00000531430 RELTQ969Z4 430 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 C8orf44Q96CB5 159 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 ALS2CR12Q96Q35 445 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 LMF1Q96S06 567 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 VAT1Q99536 393 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 BPIFA3Q9BQP9 254 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 CRB3Q9BUF7 120 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 HEMGNQ9BXL5 484 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 CUTCQ9NTM9 273 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 STOX2Q9P2F5 926 aaPredicted RBP8.87□□□□□ -0.99
NEDD8-206ENST00000531430 IMPACTQ9P2X3 320 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 SEC14L3Q9UDX4 400 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 POLG2Q9UHN1 485 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 TRHDEQ9UKU6 1024 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 CCDC168Q8NDH2 2452 aa8.87□□□□□ -0.99
NEDD8-206ENST00000531430 PDZD2O15018 2839 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 MACROD2A1Z1Q3 448 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 H3BMH7 237 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 MAP2K7O14733 419 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 KDM1AO60341 852 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 WFS1O76024 890 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 ALBP02768 609 aa8.86□□□□□ -0.99
NEDD8-206ENST00000531430 TMEM253P0C7T8 217 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms