RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 LRRC61Q9BV99 259 aa13.58□□□□□ -0.24
NXF1-207ENST00000530875 WWOXQ9NZC7 414 aa13.58□□□□□ -0.24
NXF1-207ENST00000530875 PTBP2Q9UKA9 531 aaKnown RBP13.58□□□□□ -0.24
NXF1-207ENST00000530875 A0A0G2JND7 137 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 SNNO75324 88 aaPredicted RBP13.57□□□□□ -0.24
NXF1-207ENST00000530875 SUPT7LO94864 414 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 TGDSO95455 350 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 AP1S2P56377 157 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 CDKL1Q00532 357 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 PRKG2Q13237 762 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 PRR23BQ6ZRT6 265 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 ASRGL1Q7L266 308 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 TAF8Q7Z7C8 310 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 FBXO15Q8NCQ5 510 aaPredicted RBP13.57□□□□□ -0.24
NXF1-207ENST00000530875 OR5K2Q8NHB8 316 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 TMEM79Q9BSE2 394 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 TMEM120AQ9BXJ8 343 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 COL25A1Q9BXS0 654 aaPredicted RBP13.57□□□□□ -0.24
NXF1-207ENST00000530875 GSDMCQ9BYG8 508 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 PCDHGA2Q9Y5H1 932 aa13.57□□□□□ -0.24
NXF1-207ENST00000530875 PRR5-ARHGAP8B1AHC4 643 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 TMEM114B3SHH9 223 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 UNC5CO95185 931 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 HALP42357 657 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 HSPA7P48741 367 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 ARFIP2P53365 341 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 ABCE1P61221 599 aaKnown RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 OCRLQ01968 901 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 RCN2Q14257 317 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 RPE65Q16518 533 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 ZXDCQ2QGD7 858 aaPredicted RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 KIF19Q2TAC6 998 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 CDKL4Q5MAI5 379 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 ABRAXAS1Q6UWZ7 409 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 CCDC138Q96M89 665 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 NSUN5Q96P11 429 aaKnown RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 FERD3LQ96RJ6 166 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 DRC3Q9H069 523 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 TRIT1Q9H3H1 467 aaKnown RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 GSTO2Q9H4Y5 243 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 THAP1Q9NVV9 213 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 TAAR2Q9P1P5 351 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 SUSD2Q9UGT4 822 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 ZFP69BQ9UJL9 534 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 PCOLCE2Q9UKZ9 415 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 PLAGL1Q9UM63 463 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 TDRKHQ9Y2W6 561 aaKnown RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 KMT2EQ8IZD2 1858 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 TRBV23OR9-2A0A075B6M9 112 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 A6NCN8 305 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 MGRN1O60291 552 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 ATP5HO75947 161 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 HSPA4LO95757 839 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 SLC16A8O95907 504 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 RPN2P04844 631 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 CHRNGP07510 517 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 RPS17P08708 135 aaKnown RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 TSPAN8P19075 237 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 GDF5P43026 501 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 HNMTP50135 292 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 CDH13P55290 713 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 PCBP2Q15366 365 aaKnown RBP eCLIP13.56□□□□□ -0.249e-8■□□□□ 10.3
NXF1-207ENST00000530875 SNCBQ16143 134 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 LPAL2Q16609 132 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 ARL13AQ5H913 290 aaPredicted RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 ANKS6Q68DC2 871 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 TTC23LQ6PF05 361 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 WASH2PQ6VEQ5 465 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 MTDHQ86UE4 582 aaKnown RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 SYT12Q8IV01 421 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 DCUN1D3Q8IWE4 304 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 OR9A1PQ8NGU1 263 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 MAGEC3Q8TD91 643 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 PPP4R1Q8TF05 950 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 SORT1Q99523 831 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 HGH1Q9BTY7 390 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 SHCBP1LQ9BZQ2 653 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 CD244Q9BZW8 370 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 ATG10Q9H0Y0 220 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 KCNK13Q9HB14 408 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 WASH6PQ9NQA3 447 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 STOX2Q9P2F5 926 aaPredicted RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 PCTPQ9UKL6 214 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 TNPO3Q9Y5L0 923 aaKnown RBP13.56□□□□□ -0.24
NXF1-207ENST00000530875 SNX11Q9Y5W9 270 aa13.56□□□□□ -0.24
NXF1-207ENST00000530875 PRAMEF33A0A0G2JMD5 474 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 PRR33A8MZF0 331 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 NPHS1O60500 1241 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 CCNT2O60583 730 aaKnown RBP13.55□□□□□ -0.24
NXF1-207ENST00000530875 MTHFD1P11586 935 aaKnown RBP13.55□□□□□ -0.24
NXF1-207ENST00000530875 F3P13726 295 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 CTSKP43235 329 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 BNC1Q01954 994 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 GRB7Q14451 532 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 KRT33BQ14525 404 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 FRMD7Q6ZUT3 714 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 TBC1D21Q8IYX1 336 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 LSMEM2Q8N112 164 aa13.55□□□□□ -0.24
NXF1-207ENST00000530875 TCAIMQ8N3R3 496 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms