RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 RPGRIP1LQ68CZ1 1315 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 A0A0G2JNG1 304 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 MED19A0JLT2 244 aaPredicted RBP4.3□□□□□ -1.72
C11orf88-204ENST00000529661 C16orf97H3BN30 126 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 WDPCPO95876 746 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 TCF4P15884 667 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 OAS2P29728 719 aaKnown RBP4.3□□□□□ -1.72
C11orf88-204ENST00000529661 AHRP35869 848 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 CRKLP46109 303 aaKnown RBP4.3□□□□□ -1.72
C11orf88-204ENST00000529661 LHX1P48742 406 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 TPD52P55327 224 aaPredicted RBP4.3□□□□□ -1.72
C11orf88-204ENST00000529661 SCN1BQ07699 218 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 MZT1Q08AG7 82 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 KIR2DS5Q14953 304 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 RBBP5Q15291 538 aaKnown RBP4.3□□□□□ -1.72
C11orf88-204ENST00000529661 E2F5Q15329 346 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 KRTAP24-1Q3LI83 254 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 SFMBT2Q5VUG0 894 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 MFSD12Q6NUT3 480 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 FAM171BQ6P995 826 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 MOXD1Q6UVY6 613 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 FAM43BQ6ZT52 329 aaPredicted RBP4.3□□□□□ -1.72
C11orf88-204ENST00000529661 C11orf57Q6ZUT1 292 aaPredicted RBP4.3□□□□□ -1.72
C11orf88-204ENST00000529661 TMPRSS11BQ86T26 416 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 TLK2Q86UE8 772 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 COMMD2Q86X83 199 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 DCUN1D3Q8IWE4 304 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 CPSF7Q8N684 471 aaKnown RBP4.3□□□□□ -1.72
C11orf88-204ENST00000529661 ZNF611Q8N823 705 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 C9orf43Q8TAL5 461 aaPredicted RBP4.3□□□□□ -1.72
C11orf88-204ENST00000529661 RNF128Q8TEB7 428 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 CORO2AQ92828 525 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 ABHD8Q96I13 439 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 UHRF2Q96PU4 802 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 KATNB1Q9BVA0 655 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 Q9N2K0 584 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 TBC1D7Q9P0N9 293 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 B3GAT1Q9P2W7 334 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 LRWD1Q9UFC0 647 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 RALYQ9UKM9 306 aaKnown RBP4.3□□□□□ -1.72
C11orf88-204ENST00000529661 RNF150Q9ULK6 438 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 SNX7Q9UNH6 387 aa4.3□□□□□ -1.72
C11orf88-204ENST00000529661 ENO4A6NNW6 628 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 SOCS5O75159 536 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 LIPFP07098 398 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 H1F0P07305 194 aaKnown RBP4.29□□□□□ -1.72
C11orf88-204ENST00000529661 CSN3P07498 182 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 FAM58BPP0C7Q3 252 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 CD22P20273 847 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 SLC6A6P31641 620 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 PSMC4P43686 418 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 RPL24P83731 157 aaKnown RBP4.29□□□□□ -1.72
C11orf88-204ENST00000529661 MAT1AQ00266 395 aaKnown RBP4.29□□□□□ -1.72
C11orf88-204ENST00000529661 DUOXA1Q1HG43 343 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 SYT14P1Q58G82 188 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 NDUFAF5Q5TEU4 345 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 FAM91A1Q658Y4 838 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 SPATA21Q7Z572 469 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 DSG4Q86SJ6 1040 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 GPALPP1Q8IXQ4 340 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 TIGD4Q8IY51 512 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 PPFIBP2Q8ND30 876 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 GRAPLQ8TC17 118 aaPredicted RBP4.29□□□□□ -1.72
C11orf88-204ENST00000529661 SSMEM1Q8WWF3 244 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 DHX58Q96C10 678 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 OTUB1Q96FW1 271 aaPredicted RBP4.29□□□□□ -1.72
C11orf88-204ENST00000529661 HES6Q96HZ4 224 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 CCDC114Q96M63 670 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 FKRPQ9H9S5 495 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 TRPC7Q9HCX4 862 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 SERINC1Q9NRX5 453 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 ZNF701Q9NV72 531 aaPredicted RBP4.29□□□□□ -1.72
C11orf88-204ENST00000529661 POLLQ9UGP5 575 aa4.29□□□□□ -1.72
C11orf88-204ENST00000529661 CPSF3Q9UKF6 684 aaKnown RBP4.29□□□□□ -1.72
C11orf88-204ENST00000529661 SPIN1Q9Y657 262 aaPredicted RBP4.29□□□□□ -1.72
C11orf88-204ENST00000529661 BICDL2A1A5D9 508 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 HYKKA2RU49 373 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 ASPDHA6ND91 283 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 IFIT3O14879 490 aaKnown RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 AP5Z1O43299 807 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 STX6O43752 255 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 SP1P08047 785 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 KRT19P08727 400 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 PLA2G4BP0C869 781 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 SMIM18P0DKX4 95 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 SAGP10523 405 aaPredicted RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 CBLP22681 906 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 CALRP27797 417 aaKnown RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 PRKCIP41743 596 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 GMPSP49915 693 aaPredicted RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 MAPK12P53778 367 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 UBASH3AP57075 661 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 PHEXP78562 749 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 MEP1BQ16820 701 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 TWISTNBQ3B726 338 aaPredicted RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 ACCSLQ4AC99 568 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 SLC10A5Q5PT55 438 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 PACS1Q6VY07 963 aa4.28□□□□□ -1.72
C11orf88-204ENST00000529661 TRMT1LQ7Z2T5 733 aaKnown RBP4.28□□□□□ -1.72
C11orf88-204ENST00000529661 PIWIL3Q7Z3Z3 882 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms