RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 MRGPRGQ86SM5 289 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 CPNE8Q86YQ8 564 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 ADGRF3Q8IZF5 1079 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 ZNF808Q8N4W9 903 aaPredicted RBP8.66□□□□□ -1.02
VPS11-203ENST00000529545 LILRA3Q8N6C8 439 aaPredicted RBP8.66□□□□□ -1.02
VPS11-203ENST00000529545 PHC3Q8NDX5 983 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 IPMKQ8NFU5 416 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 OR1N1Q8NGS0 311 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 TFB1MQ8WVM0 346 aaKnown RBP8.66□□□□□ -1.02
VPS11-203ENST00000529545 ITLN2Q8WWU7 325 aaPredicted RBP8.66□□□□□ -1.02
VPS11-203ENST00000529545 CTNNBL1Q8WYA6 563 aaPredicted RBP8.66□□□□□ -1.02
VPS11-203ENST00000529545 TFGQ92734 400 aaPredicted RBP8.66□□□□□ -1.02
VPS11-203ENST00000529545 FKBP10Q96AY3 582 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 LMF1Q96S06 567 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 COPS8Q99627 209 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 HGH1Q9BTY7 390 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 FSD1LQ9BXM9 530 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 CHRNA10Q9GZZ6 450 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 OR52A5Q9H2C5 316 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 XKR8Q9H6D3 395 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 WDR54Q9H977 334 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 COG4Q9H9E3 785 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 FAM60AQ9NP50 221 aa8.66□□□□□ -1.02
VPS11-203ENST00000529545 KLHL8Q9P2G9 620 aaPredicted RBP8.66□□□□□ -1.02
VPS11-203ENST00000529545 DOCK10Q96BY6 2186 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 MYO7BQ6PIF6 2116 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 SETD2Q9BYW2 2564 aaPredicted RBP8.65□□□□□ -1.02
VPS11-203ENST00000529545 A0A0J9YY10 115 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 DYTNA2CJ06 578 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 CCL21O00585 134 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 PCDH17O14917 1159 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 CNOT3O75175 753 aaKnown RBP8.65□□□□□ -1.02
VPS11-203ENST00000529545 ALOX12BO75342 701 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 ALBP02768 609 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 KRT1P04264 644 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 UQCRHP07919 91 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 ATP1B2P14415 290 aaPredicted RBP8.65□□□□□ -1.02
VPS11-203ENST00000529545 UGT2B7P16662 529 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 ITGALP20701 1170 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 SSTR2P30874 369 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 CD68P34810 354 aaPredicted RBP8.65□□□□□ -1.02
VPS11-203ENST00000529545 CASP6P55212 293 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 KCNK10P57789 538 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 FOXL2P58012 376 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 ARG2P78540 354 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 RBPJQ06330 500 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 BOP1Q14137 746 aaKnown RBP8.65□□□□□ -1.02
VPS11-203ENST00000529545 TFDP2Q14188 446 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 MESDQ14696 234 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 PTPRCAPQ14761 206 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 TAF1AQ15573 450 aaPredicted RBP8.65□□□□□ -1.02
VPS11-203ENST00000529545 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.65□□□□□ -1.02
VPS11-203ENST00000529545 KRTAP21-3Q3LHN1 58 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 OVCH1Q7RTY7 1134 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 PID1Q7Z2X4 250 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 TRIM73Q86UV7 250 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 OR4K2Q8NGD2 314 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 CCDC110Q8TBZ0 833 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 NAT14Q8WUY8 206 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 THOC3Q96J01 351 aaKnown RBP8.65□□□□□ -1.02
VPS11-203ENST00000529545 FCRL5Q96RD9 977 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 VAT1Q99536 393 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 SEMA3GQ9NS98 782 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 FKBPLQ9UIM3 349 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 NXT1Q9UKK6 140 aaKnown RBP8.65□□□□□ -1.02
VPS11-203ENST00000529545 ARL5AQ9Y689 179 aa8.65□□□□□ -1.02
VPS11-203ENST00000529545 TRAV17A0A0B4J275 112 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 A0A1B0GTH6 734 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 A0A1B0GX78 115 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 CCDC78A2IDD5 438 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 C5orf60A6NFR6 353 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 ISM1B1AKI9 464 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 H3BMH7 237 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 SOCS6O14544 535 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 SGTAO43765 313 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 CRTAMO95727 393 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 SERPINC1P01008 464 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 CRYABP02511 175 aaKnown RBP8.64□□□□□ -1.03
VPS11-203ENST00000529545 GSTM1P09488 218 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 MYBL2P10244 700 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 CAPN3P20807 821 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 WDR4P57081 412 aaKnown RBP8.64□□□□□ -1.03
VPS11-203ENST00000529545 GSTM4Q03013 218 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 WASHC5Q12768 1159 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 ZIC1Q15915 447 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 INAQ16352 499 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 XKRXQ6PP77 449 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 KIRREL2Q6UWL6 708 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 TREML4Q6UXN2 200 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 UNC5AQ6ZN44 842 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 TTLL10Q6ZVT0 673 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 DNAJC22Q8N4W6 341 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 CATSPER1Q8NEC5 780 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 NR4A3Q92570 626 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 CCDC120Q96HB5 630 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 NAP1L5Q96NT1 182 aaPredicted RBP8.64□□□□□ -1.03
VPS11-203ENST00000529545 OR2A14Q96R47 310 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 NRTNQ99748 197 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 LMBRD1Q9NUN5 540 aa8.64□□□□□ -1.03
VPS11-203ENST00000529545 DDX56Q9NY93 547 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms