RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 LINGO1Q96FE5 620 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 CDADC1Q9BWV3 514 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 MROH8Q9H579 483 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 TRMT13Q9NUP7 481 aaKnown RBP14.35□□□□□ -0.11
CAPN1-214ENST00000528165 PEX16Q9Y5Y5 336 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 LOC100506127A0A0U1RQW1 187 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 PNMA8CA0A1B0GUJ8 204 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 CHRNB1P11230 501 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 MZF1P28698 734 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-214ENST00000528165 KRT6CP48668 564 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 TIGD6Q17RP2 521 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 SPANXN2Q5MJ10 180 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 TWF2Q6IBS0 349 aaKnown RBP14.35□□□□□ -0.11
CAPN1-214ENST00000528165 SNX20Q7Z614 316 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 TEX26Q8N6G2 289 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 EEF1AKMT1Q8WVE0 214 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 UBE2FQ969M7 185 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 DEPDC7Q96QD5 511 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 OR52E6Q96RD3 313 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 MYOCQ99972 504 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 COPS4Q9BT78 406 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 NXF2Q9GZY0 626 aaKnown RBP14.35□□□□□ -0.11
CAPN1-214ENST00000528165 KRT84Q9NSB2 600 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 PDP1Q9P0J1 537 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-214ENST00000528165 MKLN1Q9UL63 735 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 ABCG2Q9UNQ0 655 aa14.35□□□□□ -0.11
CAPN1-214ENST00000528165 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-214ENST00000528165 CENPXA8MT69 81 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 DSCR3O14972 297 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 TSPAN12O95859 305 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 RPLP0P05388 317 aaKnown RBP14.34□□□□□ -0.11
CAPN1-214ENST00000528165 EPHA2P29317 976 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 MAGEA2P43356 314 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 E2F2Q14209 437 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 DDR2Q16832 855 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 PRSS36Q5K4E3 855 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 P3H2Q8IVL5 708 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 NLGN4XQ8N0W4 816 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 GLB1L3Q8NCI6 653 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-214ENST00000528165 PRDM8Q9NQV8 689 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 CCDC59Q9P031 241 aaKnown RBP14.34□□□□□ -0.11
CAPN1-214ENST00000528165 COMMD10Q9Y6G5 202 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 TNS1Q9HBL0 1735 aaKnown RBP14.34□□□□□ -0.11
CAPN1-214ENST00000528165 ANKRD36A6QL64 1941 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 MMP3P08254 477 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 HTR3AP46098 478 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 CLCNKBP51801 687 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 PIK3R6Q5UE93 754 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 CACHD1Q5VU97 1274 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 PRR23CQ6ZRP0 262 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 GOLGA7Q7Z5G4 137 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 ATG16L2Q8NAA4 619 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 DNAJB3Q8WWF6 145 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 TBC1D20Q96BZ9 403 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 SIGLEC11Q96RL6 698 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 POLR1EQ9GZS1 481 aaKnown RBP14.34□□□□□ -0.11
CAPN1-214ENST00000528165 ZFP14Q9HCL3 533 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 FBXL12Q9NXK8 326 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 ZMYM5Q9UJ78 669 aa14.34□□□□□ -0.11
CAPN1-214ENST00000528165 SAMD4AQ9UPU9 718 aaKnown RBP14.34□□□□□ -0.11
CAPN1-214ENST00000528165 M0R082 166 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 PER2O15055 1255 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 NIPSNAP2O75323 286 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 SEC22BO75396 215 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 WBP4O75554 376 aaKnown RBP14.33□□□□□ -0.11
CAPN1-214ENST00000528165 SNX4O95219 450 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 MYCLP1P12525 358 aaPredicted RBP14.33□□□□□ -0.11
CAPN1-214ENST00000528165 RHOQP17081 205 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 FPR1P21462 350 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 DNAJA1P31689 397 aaKnown RBP14.33□□□□□ -0.11
CAPN1-214ENST00000528165 CSNK2BP67870 215 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 CREMQ03060 361 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 ELP6Q0PNE2 266 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 MAD2L1Q13257 205 aaPredicted RBP14.33□□□□□ -0.11
CAPN1-214ENST00000528165 AFTPHQ6ULP2 937 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 HORMAD1Q86X24 394 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 LIX1Q8N485 282 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 TRPM4Q8TD43 1214 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 ELMO1Q92556 727 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 ZYG11BQ9C0D3 744 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 QPCTLQ9NXS2 382 aa14.33□□□□□ -0.11
CAPN1-214ENST00000528165 A0A0G2JLL6 359 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 RGS14O43566 566 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 PCDHGA12O60330 932 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 HOXA9P31269 272 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 PGFP49763 221 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 CDK10Q15131 360 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 FAM209AQ5JX71 171 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 PRRT2Q7Z6L0 340 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-214ENST00000528165 MILR1Q7Z6M3 343 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 CALHM3Q86XJ0 350 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 UBQLNLQ8IYU4 475 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 KRTCAP2Q8N6L1 136 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 DNASE1L2Q92874 299 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 SLC6A13Q9NSD5 602 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 RIMKLBQ9ULI2 386 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 ANGPTL3Q9Y5C1 460 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 PPP2R3BQ9Y5P8 575 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 SMIM35A0A1B0GVV1 85 aa14.33□□□□□ -0.12
CAPN1-214ENST00000528165 OR7A17O14581 309 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms