RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 RPS7P62081 194 aaKnown RBP14.74□□□□□ -0.05
USP47-207ENST00000527733 RALGDSQ12967 914 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 PON2Q15165 354 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 SHHQ15465 462 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 TECRLQ5HYJ1 363 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 ZNF678Q5SXM1 525 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 CHRDL2Q6WN34 429 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 CDHR3Q6ZTQ4 885 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 ZCCHC10Q8TBK6 192 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 ADAMTS15Q8TE58 950 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 SLC13A3Q8WWT9 602 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 APOL4Q9BPW4 351 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 CD244Q9BZW8 370 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 FBXW2Q9UKT8 454 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 COPG1Q9Y678 874 aaKnown RBP14.74□□□□□ -0.05
USP47-207ENST00000527733 MID1O15344 667 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 CYP17A1P05093 508 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 FAM58BPP0C7Q3 252 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 HMGA1P17096 107 aaKnown RBP14.73□□□□□ -0.05
USP47-207ENST00000527733 CLK1P49759 484 aaKnown RBP14.73□□□□□ -0.05
USP47-207ENST00000527733 FRMD7Q6ZUT3 714 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 CEP97Q8IW35 865 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 BTN2A2Q8WVV5 523 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 OR52B2Q96RD2 323 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 TRIM39Q9HCM9 518 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 CYP8B1Q9UNU6 501 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 SOBPA7XYQ1 873 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 MYOGP15173 224 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 ZNF8P17098 575 aaPredicted RBP14.73□□□□□ -0.05
USP47-207ENST00000527733 ALAS2P22557 587 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 HOXD9P28356 352 aaPredicted RBP14.73□□□□□ -0.05
USP47-207ENST00000527733 HLA-FP30511 346 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 SMIM11AP58511 58 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 ZNF234Q14588 700 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 GLYATQ6IB77 296 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 CASP12Q6UXS9 341 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 RALGPS2Q86X27 583 aaPredicted RBP14.73□□□□□ -0.05
USP47-207ENST00000527733 MICU2Q8IYU8 434 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 CYP4Z2PQ8N1L4 340 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 CBARPQ8N350 705 aaPredicted RBP14.73□□□□□ -0.05
USP47-207ENST00000527733 OR2T3Q8NH03 318 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 ARRDC2Q8TBH0 407 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 THAP11Q96EK4 314 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 ATP6V1HQ9UI12 483 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 FAM234BA2RU67 622 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 PCDH7O60245 1069 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 DNAJA2O60884 412 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 ANPEPP15144 967 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 KCNC3Q14003 757 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 MBOAT1Q6ZNC8 495 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 CRISPLD1Q9H336 500 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 RIBC2Q9H4K1 309 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 ADGRE2Q9UHX3 823 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 VGLL3A8MV65 326 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 DRD1P21728 446 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 GTF2E2P29084 291 aaKnown RBP14.73□□□□□ -0.05
USP47-207ENST00000527733 LIPEQ05469 1076 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 SEMA3BQ13214 749 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 SLC14A2Q15849 920 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 WDR45BQ5MNZ6 344 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 SPESP1Q6UW49 350 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 RINLQ6ZS11 566 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 KIAA2013Q8IYS2 634 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 TMCO5AQ8N6Q1 288 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 OR2M4Q96R27 311 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 CPEB1Q9BZB8 566 aaKnown RBP14.73□□□□□ -0.05
USP47-207ENST00000527733 MUC13Q9H3R2 512 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 SCHIP1Q9P0W5 487 aaPredicted RBP14.73□□□□□ -0.05
USP47-207ENST00000527733 CDV3Q9UKY7 258 aaKnown RBP14.73□□□□□ -0.05
USP47-207ENST00000527733 DUSP12Q9UNI6 340 aa14.73□□□□□ -0.05
USP47-207ENST00000527733 FGF3P11487 239 aaPredicted RBP14.72□□□□□ -0.05
USP47-207ENST00000527733 PRPS1L1P21108 318 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 FDXRP22570 491 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 RPL34P49207 117 aaKnown RBP14.72□□□□□ -0.05
USP47-207ENST00000527733 ARF5P84085 180 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 FAM78AQ5JUQ0 283 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 ANKRD46Q86W74 232 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 SAMD14Q8IZD0 417 aaPredicted RBP14.72□□□□□ -0.05
USP47-207ENST00000527733 PNPT1Q8TCS8 783 aaKnown RBP14.72□□□□□ -0.05
USP47-207ENST00000527733 MAGEE2Q8TD90 523 aaPredicted RBP14.72□□□□□ -0.05
USP47-207ENST00000527733 XAGE5Q8WWM1 108 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 CLPTM1LQ96KA5 538 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 WDR92Q96MX6 357 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 SAMD4AQ9UPU9 718 aaKnown RBP14.72□□□□□ -0.05
USP47-207ENST00000527733 PCDHGB3Q9Y5G1 929 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 LOC285095A0A1B0GVY8 99 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 ELOVL7A1L3X0 281 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 TGFB1P01137 390 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 MPC1LP0DKB6 136 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 HOXC8P31273 242 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 IRS1P35568 1242 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 NRF1Q16656 503 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 NUDT13Q86X67 352 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 PLD3Q8IV08 490 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 OLFM1Q99784 485 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 BRINP2Q9C0B6 783 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 TAS2R1Q9NYW7 299 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 SNX7Q9UNH6 387 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 MCM3APO60318 1980 aa14.72□□□□□ -0.05
USP47-207ENST00000527733 MATN2O00339 956 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms