RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 CYP4F2P78329 520 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 GRB7Q14451 532 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 GBX1Q14549 363 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 FLVCR1-AS1Q8TAF5 88 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 RAD51AP1Q96B01 352 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 FAM167BQ9BTA0 163 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 MENTQ9BUN1 341 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 FBXO6Q9NRD1 293 aaPredicted RBP25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 ISM1B1AKI9 464 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 TTI1O43156 1089 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 SCRG1O75711 98 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 NTRK1P04629 796 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 CD9P21926 228 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 CCNFP41002 786 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 SLC1A2P43004 574 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 CRYMQ14894 314 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 SLC5A12Q1EHB4 618 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 MSS51Q4VC12 460 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 TMEM126BQ8IUX1 230 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 PDIK1LQ8N165 341 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 ZBTB2Q8N680 514 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 FAM136AQ96C01 138 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 TCTN2Q96GX1 697 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 CHRNA10Q9GZZ6 450 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 KLHL25Q9H0H3 589 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 CCDC68Q9H2F9 335 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 LHX9Q9NQ69 397 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 IL17BQ9UHF5 180 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 FBXO5Q9UKT4 447 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 SLC39A10Q9ULF5 831 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 NFS1Q9Y697 457 aa25.47■■□□□ 1.67
TSPAN4-217ENST00000527644 A0A0J9YY10 115 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 RASGRF2O14827 1237 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 CPNE3O75131 537 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 C1orf105O95561 183 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 DLSTP36957 453 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 MC1RQ01726 317 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 BBS9Q3SYG4 887 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 HSP90AA5PQ58FG0 334 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 SPANXN3Q5MJ09 141 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 HIBCHQ6NVY1 386 aaPredicted RBP25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 TRIM73Q86UV7 250 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 KCNMB4Q86W47 210 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 C19orf47Q8N9M1 422 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 LINC01555Q8NAE3 123 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 OR2L8Q8NGY9 312 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 GABPB2Q8TAK5 448 aaPredicted RBP25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 MAGEC3Q8TD91 643 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 SLC22A18Q96BI1 424 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 TRIM51Q9BSJ1 452 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 RAB11FIP5Q9BXF6 653 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 KLHL42Q9P2K6 505 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 GALPQ9UBC7 116 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 SERTAD3Q9UJW9 196 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 CROTQ9UKG9 612 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 PCDHB3Q9Y5E6 796 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 COMMD10Q9Y6G5 202 aa25.46■■□□□ 1.67
TSPAN4-217ENST00000527644 TMEM150CB9EJG8 249 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 MATN4O95460 622 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 PEBP1P30086 187 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 CASQ1P31415 396 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 CLCN7P51798 805 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 ETF1P62495 437 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 CDHR3Q6ZTQ4 885 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 C17orf53Q8N3J3 647 aaPredicted RBP25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 RAB42Q8N4Z0 105 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 OR1L3Q8NH93 324 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 KCNJ9Q92806 393 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 EXTL1Q92935 676 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 SNF8Q96H20 258 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 KRT12Q99456 494 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 IARS2Q9NSE4 1012 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 CIDEBQ9UHD4 219 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 KCND3Q9UK17 655 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 ATRXP46100 2492 aa25.45■■□□□ 1.66
TSPAN4-217ENST00000527644 TERTO14746 1132 aaKnown RBP25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 NKX2-8O15522 239 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 BANF1O75531 89 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 F8A1P23610 371 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 ITGA8P53708 1063 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 TBR1Q16650 682 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 TTLL9Q3SXZ7 439 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 LINC00303Q3SY05 128 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 CRTC2Q53ET0 693 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 ACSBG2Q5FVE4 666 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 ZNF549Q6P9A3 640 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 CNSTQ6PJW8 725 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 STARD8Q92502 1023 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 LRFN5Q96NI6 719 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 CATSPER2Q96P56 530 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 IL17FQ96PD4 163 aa25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 RUVBL2Q9Y230 463 aaKnown RBP25.44■■□□□ 1.66
TSPAN4-217ENST00000527644 C21orf140B9A014 251 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 HAUS5O94927 633 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 SEC31AO94979 1220 aaKnown RBP25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 F7P08709 466 aaPredicted RBP25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 TCN2P20062 427 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 BDKRB1P46663 353 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 MPP1Q00013 466 aa25.43■■□□□ 1.66
TSPAN4-217ENST00000527644 ZIC1Q15915 447 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms