RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MARCH2Q9P0N8 246 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF232Q9UNY5 417 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 FNDC1Q4ZHG4 1894 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-208ENST00000527323 A0A0D9SEW6 157 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 A0A0U1RQS6 177 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 GRXCR2A6NFK2 248 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 KLK8O60259 260 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 UGT2B4P06133 528 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 PFKLP17858 780 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 RAPSNQ13702 412 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 PON2Q15165 354 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 GTDC1Q4AE62 458 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 PAGE2Q7Z2X7 111 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 DCP2Q8IU60 420 aaKnown RBP12.25□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF548Q8NEK5 533 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-208ENST00000527323 MDGA1Q8NFP4 955 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 OR7D4Q8NG98 312 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 CLHC1Q8NHS4 586 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 CINPQ9BW66 212 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-208ENST00000527323 ATP13A3Q9H7F0 1226 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 AKIP1Q9NQ31 210 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 PNMA8BQ9ULN7 279 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-208ENST00000527323 VPS9D1Q9Y2B5 631 aa12.25□□□□□ -0.45
CAPN1-208ENST00000527323 MYO1GB0I1T2 1018 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 SLC22A1O15245 554 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 STX7O15400 261 aaKnown RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 SCELO95171 688 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 TSPAN12O95859 305 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 SERPINA1P01009 418 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 ALOX5P09917 674 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 ITGB6P18564 788 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF140P52738 457 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 PRMT2P55345 433 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 HMGCS1Q01581 520 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 IFITM3Q01628 133 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 GTF2H2Q13888 395 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 ADPRMQ3LIE5 342 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 SPANXN4Q5MJ08 99 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF691Q5VV52 312 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 KIAA1841Q6NSI8 718 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 GTF2H2CQ6P1K8 395 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 PJA1Q8NG27 643 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 FAR1Q8WVX9 515 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 GTF2H4Q92759 462 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 BHMTQ93088 406 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 FAM120BQ96EK7 910 aaKnown RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 PPP3R2Q96LZ3 170 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 EGFL8Q99944 293 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 SH3GL1Q99961 368 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 ASPSCR1Q9BZE9 553 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 FBXO44Q9H4M3 255 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 TMEM161AQ9NX61 479 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 SCN3BQ9NY72 215 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 USE1Q9NZ43 259 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 ITGB1BP2Q9UKP3 347 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 SCML2Q9UQR0 700 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 FAM32AQ9Y421 112 aaKnown RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 PCDHGC4Q9Y5F7 938 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 M0QZQ0 153 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 SEC22BO75396 215 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 JRKO75564 520 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 CREG1O75629 220 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 GALTP07902 379 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 PCMT1P22061 227 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 LPOP22079 712 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 HSPA7P48741 367 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 ALDH7A1P49419 539 aaKnown RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 TTPAP49638 278 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 YBEYP58557 167 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 RPS3AP61247 264 aaKnown RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 TAF1AQ15573 450 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 TRIP4Q15650 581 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 FAM109BQ6ICB4 259 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 RNF19BQ6ZMZ0 732 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 C16orf59Q7L2K0 433 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 P2RY8Q86VZ1 359 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 MICU2Q8IYU8 434 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 LGI2Q8N0V4 545 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF513Q8N8E2 541 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 CD200R1Q8TD46 325 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 FBXO32Q969P5 355 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 MYEOVQ96EZ4 313 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 DACH2Q96NX9 599 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 OR52E6Q96RD3 313 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 TMEM45AQ9NWC5 275 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 MARCH5Q9NX47 278 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 TPRKBQ9Y3C4 175 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 PRMT5O14744 637 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 DNAJB5O75953 348 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 SEC24AO95486 1093 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 GSNP06396 782 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 CCDC159P0C7I6 412 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 BMP4P12644 408 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 FPGSQ05932 587 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 PTPRRQ15256 657 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 CARTPTQ16568 116 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 SLC22A16Q86VW1 577 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 HIPK1Q86Z02 1210 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 PLD3Q8IV08 490 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms