RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 S1PR4O95977 384 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 PRB1P04280 392 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 KLK3P07288 261 aaPredicted RBP19.93■□□□□ 0.78
VPS28-206ENST00000526734 HBQ1P09105 142 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 TPBGLP0DKB5 382 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 PKMP14618 531 aaKnown RBP19.93■□□□□ 0.78
VPS28-206ENST00000526734 ABRQ12979 859 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 LONRF1Q17RB8 773 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 ZNF470Q6ECI4 717 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 FAM167BQ9BTA0 163 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 KLHL42Q9P2K6 505 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 TUBD1Q9UJT1 453 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 CTAGE9A4FU28 777 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 ISM1B1AKI9 464 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 TMEM150CB9EJG8 249 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 GOLGA8KD6RF30 607 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 E5RI56 91 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 GOLGA8TH3BQL2 631 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 CCDC188H7C350 402 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 RASGRF2O14827 1237 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 TTC4O95801 387 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 NTRK1P04629 796 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 CYP2A7P20853 494 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 CD9P21926 228 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 FMO4P31512 558 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 PAFAH1B1P43034 410 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 CCR10P46092 362 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 ITGA1P56199 1179 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 GBX1Q14549 363 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 TTLL9Q3SXZ7 439 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 CENPUQ71F23 418 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 GPR135Q8IZ08 494 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 OR2L8Q8NGY9 312 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 CFAP61Q8NHU2 1237 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 CT55Q8WUE5 264 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 SKA2Q8WVK7 121 aaPredicted RBP19.92■□□□□ 0.78
VPS28-206ENST00000526734 N4BP2L2Q92802 583 aaPredicted RBP19.92■□□□□ 0.78
VPS28-206ENST00000526734 SIGLEC10Q96LC7 697 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 CCDC68Q9H2F9 335 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 SLC39A10Q9ULF5 831 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 COMMD10Q9Y6G5 202 aa19.92■□□□□ 0.78
VPS28-206ENST00000526734 E7EQ34 232 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 NKX2-8O15522 239 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 PVRP15151 417 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 PGAM1P18669 254 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 CHRM3P20309 590 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 RPS15P62841 145 aaKnown RBP19.91■□□□□ 0.78
VPS28-206ENST00000526734 COL9A2Q14055 689 aaPredicted RBP19.91■□□□□ 0.78
VPS28-206ENST00000526734 ZNF517Q6ZMY9 492 aaPredicted RBP19.91■□□□□ 0.78
VPS28-206ENST00000526734 CDHR3Q6ZTQ4 885 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 CREG2Q8IUH2 290 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 ZBTB2Q8N680 514 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 EXD3Q8N9H8 876 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.91■□□□□ 0.78
VPS28-206ENST00000526734 OR1L3Q8NH93 324 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 FLVCR1-AS1Q8TAF5 88 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 NRTNQ99748 197 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 DPH2Q9BQC3 489 aaPredicted RBP19.91■□□□□ 0.78
VPS28-206ENST00000526734 MENTQ9BUN1 341 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 C20orf96Q9NUD7 363 aaPredicted RBP19.91■□□□□ 0.78
VPS28-206ENST00000526734 INTS7Q9NVH2 962 aaKnown RBP19.91■□□□□ 0.78
VPS28-206ENST00000526734 GEMIN8Q9NWZ8 242 aaKnown RBP19.91■□□□□ 0.78
VPS28-206ENST00000526734 SPHK1Q9NYA1 384 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 SPATA7Q9P0W8 599 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 PLAGL1Q9UM63 463 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 CRYL1Q9Y2S2 319 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 AP1M2Q9Y6Q5 423 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 FAM169AQ9Y6X4 670 aa19.91■□□□□ 0.78
VPS28-206ENST00000526734 NIPSNAP2O75323 286 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 KATNA1O75449 491 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 C1orf105O95561 183 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 PRKAR1AP10644 381 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 F8A1P23610 371 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 GRB7Q14451 532 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 KCTD19Q17RG1 926 aaPredicted RBP19.9■□□□□ 0.78
VPS28-206ENST00000526734 IZUMO3Q5VZ72 239 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 NEK10Q6ZWH5 1172 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 HMGCLL1Q8TB92 370 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 APOBEC4Q8WW27 367 aaKnown RBP19.9■□□□□ 0.78
VPS28-206ENST00000526734 KCNJ9Q92806 393 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 CLIP3Q96DZ5 547 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 SEMA4CQ9C0C4 833 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 SLC7A5P2Q9GIP4 190 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 ACTR5Q9H9F9 607 aaPredicted RBP19.9■□□□□ 0.78
VPS28-206ENST00000526734 FAM114A2Q9NRY5 505 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 PYCARDQ9ULZ3 195 aa19.9■□□□□ 0.78
VPS28-206ENST00000526734 MEN1O00255 615 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 NDC80O14777 642 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 CREG1O75629 220 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 MATN4O95460 622 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 FAM87AP0C7U9 286 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 OAS2P29728 719 aaKnown RBP19.89■□□□□ 0.77
VPS28-206ENST00000526734 PTGIRP43119 386 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 DR1Q01658 176 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 GPS2Q13227 327 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 NAA25Q14CX7 972 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 MORF4L2Q15014 288 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 ZNF789Q5FWF6 425 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 C16orf46Q6P387 395 aa19.89■□□□□ 0.77
VPS28-206ENST00000526734 SYVN1Q86TM6 617 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms