RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 PLAGL1Q9UM63 463 aa12.54□□□□□ -0.4
SMPD1-202ENST00000526280 POC1B-GALNT4F8VUJ3 575 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 MYO1CO00159 1063 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 MATN2O00339 956 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 BTN3A1O00481 513 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 RASGRF2O14827 1237 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 TOX3O15405 576 aaPredicted RBP12.53□□□□□ -0.4
SMPD1-202ENST00000526280 ZBTB14O43829 449 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 C8GP07360 202 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 INHBAP08476 426 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 STMN1P16949 149 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 PKLRP30613 574 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 MSH2P43246 934 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 RAB10P61026 200 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 PPP1CAP62136 330 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 PRKAA1Q13131 559 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 UAP1Q16222 522 aaPredicted RBP12.53□□□□□ -0.4
SMPD1-202ENST00000526280 GLIPR1L2Q4G1C9 344 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.53□□□□□ -0.4
SMPD1-202ENST00000526280 SNAP47Q5SQN1 464 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 MROH9Q5TGP6 573 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 ARMC6Q6NXE6 501 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 IRGCQ6NXR0 463 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 UBE2R2Q712K3 238 aaPredicted RBP12.53□□□□□ -0.4
SMPD1-202ENST00000526280 NKAPQ8N5F7 415 aaKnown RBP12.53□□□□□ -0.4
SMPD1-202ENST00000526280 RCBTB1Q8NDN9 531 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 OR9A1PQ8NGU1 263 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 AENQ8WTP8 325 aaKnown RBP12.53□□□□□ -0.4
SMPD1-202ENST00000526280 ANKRD49Q8WVL7 239 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 DLG3Q92796 817 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 CD180Q99467 661 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 DHRS4Q9BTZ2 278 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 SLC12A9Q9BXP2 914 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 GPAMQ9HCL2 828 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 SEMA5BQ9P283 1151 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 KLHL3Q9UH77 587 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 ZNF180Q9UJW8 692 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 ADAMTS6Q9UKP5 1117 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 IKBKGQ9Y6K9 419 aa12.53□□□□□ -0.4
SMPD1-202ENST00000526280 TPRP12270 2363 aaKnown RBP12.52□□□□□ -0.4
SMPD1-202ENST00000526280 CCDC187A0A096LP49 1063 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 EXOC1LA0A1B0GW35 172 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 A0A1W2PNU3 283 aaPredicted RBP12.52□□□□□ -0.41
SMPD1-202ENST00000526280 PIPSLA2A3N6 862 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 KRT87PA6NCN2 255 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 A8MU76 341 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 C2orf74A8MZ97 194 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 HGSO14964 777 aaPredicted RBP12.52□□□□□ -0.41
SMPD1-202ENST00000526280 SLC16A5O15375 505 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 PHGDHO43175 533 aaKnown RBP12.52□□□□□ -0.41
SMPD1-202ENST00000526280 KIF1CO43896 1103 aaKnown RBP12.52□□□□□ -0.41
SMPD1-202ENST00000526280 CHRM5P08912 532 aaPredicted RBP12.52□□□□□ -0.41
SMPD1-202ENST00000526280 ANKRD34CP0C6C1 535 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 MAP4P27816 1152 aaKnown RBP12.52□□□□□ -0.41
SMPD1-202ENST00000526280 CRABP2P29373 138 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 SERPINB9P50453 376 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 KPNA2P52292 529 aaKnown RBP12.52□□□□□ -0.41
SMPD1-202ENST00000526280 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
SMPD1-202ENST00000526280 SP140Q13342 867 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 EIF3IQ13347 325 aaKnown RBP12.52□□□□□ -0.41
SMPD1-202ENST00000526280 BMPR2Q13873 1038 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 C16orf72Q14CZ0 275 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 EMBQ6PCB8 327 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 FAM92BQ6ZTR7 304 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 PRSS42Q7Z5A4 293 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 LINC01555Q8NAE3 123 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 OR2L8Q8NGY9 312 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 HMGCLL1Q8TB92 370 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 MCOLN3Q8TDD5 553 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 DENND1AQ8TEH3 1009 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 DCAKDQ8WVC6 231 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 UBLCP1Q8WVY7 318 aaPredicted RBP12.52□□□□□ -0.41
SMPD1-202ENST00000526280 UBXN10Q96LJ8 280 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 IL17FQ96PD4 163 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 PKP4Q99569 1192 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 RAB11FIP5Q9BXF6 653 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 NRSN2Q9GZP1 204 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 PARVBQ9HBI1 364 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 SPHK1Q9NYA1 384 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 ACTR10Q9NZ32 417 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 SPATA7Q9P0W8 599 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 FETUBQ9UGM5 382 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 LNPEPQ9UIQ6 1025 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 POMT2Q9UKY4 750 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 PDE10AQ9Y233 779 aa12.52□□□□□ -0.41
SMPD1-202ENST00000526280 GSAPA4D1B5 854 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 TRABD2BA6NFA1 517 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 TLCD2A6NGC4 264 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CCDC166P0CW27 439 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 ERGP11308 486 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CYP2A7P20853 494 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CNTFP26441 200 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 GCAP28676 217 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 PRDX3P30048 256 aaKnown RBP12.51□□□□□ -0.41
SMPD1-202ENST00000526280 HSD17B2P37059 387 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CSRP3P50461 194 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CASP8Q14790 479 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 KIR2DS3Q14952 304 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 ARHGAP19Q14CB8 494 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 RTP5Q14D33 572 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms