RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	FAM84B	Q96KN1	310 aa	Predicted RBP	4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	TCEANC2	Q96MN5	208 aa		4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	ERP44	Q9BS26	406 aa		4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	ABHD6	Q9BV23	337 aa		4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	OSBPL8	Q9BZF1	889 aa		4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	FZD8	Q9H461	694 aa		4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	PRMT8	Q9NR22	394 aa	Predicted RBP	4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	DNAJC17	Q9NVM6	304 aa	Known RBP	4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	BABAM1	Q9NWV8	329 aa		4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	COX16	Q9P0S2	106 aa		4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	TRPC4	Q9UBN4	977 aa		4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	FAM153A	Q9UHL3	310 aa		4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	SLC25A13	Q9UJS0	675 aa		4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	PTBP2	Q9UKA9	531 aa	Known RBP	4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.22	□□□□□ -1.73
PCM1-223	ENST00000524356	CAB39	Q9Y376	341 aa	Predicted RBP	4.22	□□□□□ -1.73
PCM1-223	ENST00000524356		A0A0A6YYC8	382 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356		A0A1W2PPM1	405 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	USP17L23	D6RBM5	183 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	NPIPB11	E5RHQ5	1161 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356		H0YCG3	227 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356		I3L1I5	382 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	EIF3D	O15371	548 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	SPRY2	O43597	315 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	CCNT1	O60563	726 aa	Known RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	NME6	O75414	186 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	AKR7A3	O95154	331 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	PRAMEF12	O95522	483 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	PRG2	P13727	222 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	PKM	P14618	531 aa	Known RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ARF4	P18085	180 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ITIH1	P19827	911 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	MMP8	P22894	467 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	MYF6	P23409	242 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	DNASE1	P24855	282 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	CHRNA3	P32297	505 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	PITPNB	P48739	271 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	GBX2	P52951	348 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ADORA2A-AS1	P86434	159 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	GCNT1	Q02742	428 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ZNF91	Q05481	1191 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	GFPT1	Q06210	699 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	DMTN	Q08495	405 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	SREBF2	Q12772	1141 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	CETN1	Q12798	172 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	CUL2	Q13617	745 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	KCNC3	Q14003	757 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	SLC39A14	Q15043	492 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	SGCB	Q16585	318 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	AARD	Q4LEZ3	155 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	C6orf136	Q5SQH8	315 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	C10orf76	Q5T2E6	689 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	STXBP5	Q5T5C0	1151 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	LCE1F	Q5T754	118 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	CYP4A22	Q5TCH4	519 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	KIF6	Q6ZMV9	814 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ARMCX2	Q7L311	632 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ARMC9	Q7Z3E5	817 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	CACNA2D4	Q7Z3S7	1137 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ABI3BP	Q7Z7G0	1075 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	TLK2	Q86UE8	772 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	TDRP	Q86YL5	185 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	SCYL3	Q8IZE3	742 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	GHDC	Q8N2G8	530 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	CERS5	Q8N5B7	392 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	BANP	Q8N9N5	519 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	OR52L2P	Q8NGH6	319 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	OR10S1	Q8NGN2	331 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	RNASE8	Q8TDE3	154 aa	Known RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ROBO4	Q8WZ75	1007 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ARSG	Q96EG1	525 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	HES6	Q96HZ4	224 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ZNF479	Q96JC4	524 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	PRMT6	Q96LA8	375 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	SAMD8	Q96LT4	415 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	GUCD1	Q96NT3	240 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	HNRNPAB	Q99729	332 aa	Known RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	THAP7	Q9BT49	309 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	H2AFJ	Q9BTM1	129 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	TKTL2	Q9H0I9	626 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	DEFB129	Q9H1M3	183 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	P2RY12	Q9H244	342 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	PLEKHA4	Q9H4M7	779 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ANKZF1	Q9H8Y5	726 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	TM9SF3	Q9HD45	589 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	TRIM36	Q9NQ86	728 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	DDX4	Q9NQI0	724 aa	Known RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ERAP1	Q9NZ08	941 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	HMG20B	Q9P0W2	317 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	CLIP2	Q9UDT6	1046 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	FBXW2	Q9UKT8	454 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	STX8	Q9UNK0	236 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	EXO1	Q9UQ84	846 aa	Known RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	ZNF148	Q9UQR1	794 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	TDRKH	Q9Y2W6	561 aa	Known RBP	4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	PKP3	Q9Y446	797 aa		4.21	□□□□□ -1.74
PCM1-223	ENST00000524356	MUC3A	Q02505	3323 aa		4.21	□□□□□ -1.74

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