RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 KIFC3Q9BVG8 833 aa5.57□□□□□ -1.52
CPNE3-206ENST00000523469 CHMP1AQ9HD42 196 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-206ENST00000523469 FAM118AQ9NWS6 357 aa5.57□□□□□ -1.52
CPNE3-206ENST00000523469 TAS2R14Q9NYV8 317 aa5.57□□□□□ -1.52
CPNE3-206ENST00000523469 FAF1Q9UNN5 650 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-206ENST00000523469 EDC4Q6P2E9 1401 aaKnown RBP5.57□□□□□ -1.52
CPNE3-206ENST00000523469 LOC100509620A0A075B734 347 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 AVILO75366 819 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 BAG4O95429 457 aaKnown RBP5.56□□□□□ -1.52
CPNE3-206ENST00000523469 EPS15P42566 896 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 ARSEP51690 589 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 SNRPEP62304 92 aaKnown RBP5.56□□□□□ -1.52
CPNE3-206ENST00000523469 STK4Q13043 487 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 PCLAFQ15004 111 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 NTRK2Q16620 822 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 DUOXA1Q1HG43 343 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 C15orf59Q2T9L4 293 aaPredicted RBP5.56□□□□□ -1.52
CPNE3-206ENST00000523469 FAM98BQ52LJ0 330 aaKnown RBP5.56□□□□□ -1.52
CPNE3-206ENST00000523469 TRMT1LQ7Z2T5 733 aaKnown RBP5.56□□□□□ -1.52
CPNE3-206ENST00000523469 KBTBD6Q86V97 674 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 FAM122AQ96E09 287 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 SLX1AQ9BQ83 275 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 ZNF334Q9HCZ1 680 aaPredicted RBP5.56□□□□□ -1.52
CPNE3-206ENST00000523469 GIMAP4Q9NUV9 329 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 PCDHGB4Q9UN71 923 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 ZNF148Q9UQR1 794 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 PTRH2Q9Y3E5 179 aaKnown RBP5.56□□□□□ -1.52
CPNE3-206ENST00000523469 SNX8Q9Y5X2 465 aa5.56□□□□□ -1.52
CPNE3-206ENST00000523469 MKI67P46013 3256 aaKnown RBP5.55□□□□□ -1.52
CPNE3-206ENST00000523469 A0A0B4J293 547 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 A0A1W2PPI3 338 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 ENTPD3O75355 529 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 LIPFP07098 398 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 KRT19P08727 400 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 ANOS1P23352 680 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 ACTN2P35609 894 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 EIF2DP41214 584 aaKnown RBP5.55□□□□□ -1.52
CPNE3-206ENST00000523469 MMP15P51511 669 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 KIR2DS3Q14952 304 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 NDUFAF5Q5TEU4 345 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 SLC26A9Q7LBE3 791 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 PTOV1Q86YD1 416 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 SEMA4DQ92854 862 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 COG3Q96JB2 828 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 ST6GAL2Q96JF0 529 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 NEUROD6Q96NK8 337 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 PAFAH2Q99487 392 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 SPATC1LQ9H0A9 340 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 PPIL3Q9H2H8 161 aaKnown RBP5.55□□□□□ -1.52
CPNE3-206ENST00000523469 KCNK15Q9H427 330 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 UPF2Q9HAU5 1272 aaKnown RBP5.55□□□□□ -1.52
CPNE3-206ENST00000523469 LARSQ9P2J5 1176 aaKnown RBP5.55□□□□□ -1.52
CPNE3-206ENST00000523469 SCN7AQ01118 1682 aa5.55□□□□□ -1.52
CPNE3-206ENST00000523469 HMGB1P1B2RPK0 211 aaPredicted RBP5.54□□□□□ -1.52
CPNE3-206ENST00000523469 AHCYL1O43865 530 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 GPR137BO60478 399 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 LDLRP01130 860 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 PAX1P15863 534 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 TRIM21P19474 475 aaKnown RBP5.54□□□□□ -1.52
CPNE3-206ENST00000523469 STAT2P52630 851 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 SIRPAP78324 504 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 MELKQ14680 651 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 GCNT6Q5T4J0 391 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 ADALQ6DHV7 355 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 MEX3BQ6ZN04 569 aaKnown RBP5.54□□□□□ -1.52
CPNE3-206ENST00000523469 HAUS6Q7Z4H7 955 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 SLC22A18Q96BI1 424 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 ALG14Q96F25 216 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 C17orf77Q96MU5 243 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 NUDT16L1Q9BRJ7 211 aaKnown RBP5.54□□□□□ -1.52
CPNE3-206ENST00000523469 SDF2L1Q9HCN8 221 aa5.54□□□□□ -1.52
CPNE3-206ENST00000523469 KIF20BQ96Q89 1820 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 ASTN2O75129 1339 aaPredicted RBP5.53□□□□□ -1.52
CPNE3-206ENST00000523469 ADAMDEC1O15204 470 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 PRKNO60260 465 aaPredicted RBP5.53□□□□□ -1.52
CPNE3-206ENST00000523469 SLC22A3O75751 556 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 BEST1O76090 585 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 GCNT3O95395 438 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 IGKV3-20P01619 116 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 VPREB1P12018 145 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 NR1D1P20393 614 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 NR2C2P49116 596 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 PSMC6P62333 389 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 MBTD1Q05BQ5 628 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 RRS1Q15050 365 aaKnown RBP5.53□□□□□ -1.52
CPNE3-206ENST00000523469 ALS2CLQ60I27 953 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 DHRS7BQ6IAN0 325 aaPredicted RBP5.53□□□□□ -1.52
CPNE3-206ENST00000523469 KLC3Q6P597 504 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 TMCO3Q6UWJ1 677 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 LDB1Q86U70 411 aaPredicted RBP5.53□□□□□ -1.52
CPNE3-206ENST00000523469 MCUQ8NE86 351 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 LRRC8CQ8TDW0 803 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 PRPF31Q8WWY3 499 aaKnown RBP5.53□□□□□ -1.52
CPNE3-206ENST00000523469 MXD3Q9BW11 206 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 MMP27Q9H306 513 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 TFB2MQ9H5Q4 396 aaKnown RBP5.53□□□□□ -1.52
CPNE3-206ENST00000523469 SLA2Q9H6Q3 261 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 APOBEC3GQ9HC16 384 aaKnown RBP5.53□□□□□ -1.52
CPNE3-206ENST00000523469 HHATLQ9HCP6 504 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 PDE7BQ9NP56 450 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms