RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 KCNE1BA0A087WTH5 132 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 KRT6AP02538 564 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 KRT6BP04259 564 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 IL6P05231 212 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 C7P10643 843 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 KRT6CP48668 564 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TUBA4AP68366 448 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 MAP7Q14244 749 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PTCHD3Q3KNS1 767 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SLC22A15Q8IZD6 547 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 RNF175Q8N4F7 328 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GLB1L3Q8NCI6 653 aaPredicted RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SELENOMQ8WWX9 145 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TMBIM1Q969X1 311 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CCDC115Q96NT0 180 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 OR52E6Q96RD3 313 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 P2RY13Q9BPV8 354 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 BDH2Q9BUT1 245 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 BBS2Q9BXC9 721 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LINC00597Q9H2U6 94 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PARVBQ9HBI1 364 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 KLHL42Q9P2K6 505 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GSTA4O15217 222 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 NUAK1O60285 661 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TULP3O75386 442 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 BMP10O95393 424 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LINC00271P0C7V0 271 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 RAP2AP10114 183 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PABPC1P11940 636 aaKnown RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ATP1B2P14415 290 aaPredicted RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 IST1P53990 364 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 RPS14P62263 151 aaKnown RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PLCL1Q15111 1095 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ZIK1Q3SY52 487 aaPredicted RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 RUNDC3AQ59EK9 446 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ZNF648Q5T619 568 aaPredicted RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TMEM215Q68D42 235 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 OTOP2Q7RTS6 562 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ELMOD1Q8N336 334 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 BEND7Q8N7W2 519 aaPredicted RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 OR2A12Q8NGT7 310 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SORCS1Q8WY21 1168 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TSSK3Q96PN8 268 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LIN28AQ9H9Z2 209 aaKnown RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 C8orf4Q9NR00 106 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 FAM8A1Q9UBU6 413 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ADGRE2Q9UHX3 823 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PCDHGA11Q9Y5H2 935 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CHD7Q9P2D1 2997 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TRBV5-3A0A0A0MS03 114 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TRIM64CA6NLI5 447 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 RFPL2O75678 378 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PRSS23O95084 383 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GSNP06396 782 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ITPKAP23677 461 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SLC6A12P48065 614 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ADARB1P78563 741 aaKnown RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CREMQ03060 361 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TEAD2Q15562 447 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 FAM98BQ52LJ0 330 aaKnown RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GDPD4Q6W3E5 623 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CCDC149Q6ZUS6 474 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LRRC70Q7Z2Q7 622 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HSD11B1LQ7Z5J1 315 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ADIPOR2Q86V24 386 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ANKRD46Q86W74 232 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 KLHL23Q8NBE8 558 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TNIP2Q8NFZ5 429 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ZNF641Q96N77 438 aaPredicted RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PAIP1Q9H074 479 aaKnown RBP10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ATG10Q9H0Y0 220 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 MTG2Q9H4K7 406 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GORASP2Q9H8Y8 452 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CD320Q9NPF0 282 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SERHLQ9NQF3 203 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HPS4Q9NQG7 708 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LIMD1Q9UGP4 676 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PPT2Q9UMR5 302 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SLC22A14Q9Y267 594 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PCDHB14Q9Y5E9 798 aa10.49□□□□□ -0.73
RAB11FIP1-204ENST00000522774 A0A087WXM4 84 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TRIM43BA6NCK2 446 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TRIM64A6NGJ6 449 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SGTAO43765 313 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 MTHFRP42898 656 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 YAP1P46937 504 aaKnown RBP10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CHRNB3Q05901 458 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LAPTM5Q13571 262 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GCNT7Q6ZNI0 430 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 USP51Q70EK9 711 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LPCAT2Q7L5N7 544 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PATL1Q86TB9 770 aaKnown RBP10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TRIM43Q96BQ3 446 aaPredicted RBP10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 APIPQ96GX9 242 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 EGLN2Q96KS0 407 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 INPP5KQ9BT40 448 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CEP44Q9C0F1 390 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ELOVL6Q9H5J4 265 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
RAB11FIP1-204ENST00000522774 RSL24D1Q9UHA3 163 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms